Gene Daro_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0194 
Symbol 
ID3569490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp211440 
End bp212327 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID637678632 
Producttyrosine recombinase XerC subunit 
Protein accessionYP_283423 
Protein GI71905836 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones93 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCCG TCGACACGTG GCTGGCCGAA CTTTCGGACC AGCGACGCCT ATCGGCGCAC 
ACCGTTTCCA ACTATCGGCG TGATCTGCAG AAGCTGCTGG CAGCAGCGGG AGATATACCG
CTCGCCAGCC TGCAGGTGCA TCACCTCCGC CGCTTCGTCG CGCAACTGCA TGGTCAGGGG
CTGGCCGGTC GTTCTTTGGC GCGGGCCTTG TCGGCCTGGC GTGGTTTCTT TCACTGGTTG
GGCGAGCGGG GCATGGTGAA GGCCAATCCC TGCGACGGTA TCCGCCCGCC CAAATCGCCC
CGGATGCTGC CCAAGGCCTT GTCGGTCGAC GAAACCTCAC GCCTGCTGAT GCCTGTCGAC
GACGATGATC CCGTCCAGGC GGCCCGCGAC CTGGCGATGT TCGAACTATT CTATTCATCA
GGTTTGCGCC TGGCCGAACT GGTTGCCCTT GATTGCGAGG CACTGGACGA CATTGCCCAC
GAAAGTGAGG TTCGTGTATT GGGCAAGCGC AACAAGTTGC GCTTGGTGCC GGTTGGCAGC
AAGGCGCGGG AAGCGCTTGC CGCATGGGCG GCAGTGCGAA ATGAGCTGGC TAAGCCCGAG
GAAAAGGCCT TGTTCGTCGG CCAGCGGGGG GGGCGCATCA GCCCGCGCAT GGTCGAGGCC
CGACTGGCGC GCCGAGCTGT GCTGCTGGGT TTGCCGACGC ACGTGCATCC CCATATGCTG
CGGCATTCCT TCGCCTCGCA TGTCCTGCAA TCGTCGGGTG ACTTGCGGGC GGTGCAGGAG
ATGCTCGGAC ATGCCAGCAT CGCATCAACG CAGGTCTATA CGCATCTTGA TTTCCAGCAT
CTGGCGAAGG TTTACGACGC AGCTCACCCA AGGGCGAAGA GCAAGTAA
 
Protein sequence
MLAVDTWLAE LSDQRRLSAH TVSNYRRDLQ KLLAAAGDIP LASLQVHHLR RFVAQLHGQG 
LAGRSLARAL SAWRGFFHWL GERGMVKANP CDGIRPPKSP RMLPKALSVD ETSRLLMPVD
DDDPVQAARD LAMFELFYSS GLRLAELVAL DCEALDDIAH ESEVRVLGKR NKLRLVPVGS
KAREALAAWA AVRNELAKPE EKALFVGQRG GRISPRMVEA RLARRAVLLG LPTHVHPHML
RHSFASHVLQ SSGDLRAVQE MLGHASIAST QVYTHLDFQH LAKVYDAAHP RAKSK