| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0163 |
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| Symbol | |
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| ID | 3569530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 178647 |
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| End bp | 181367 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637678598 |
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| Product | DNA polymerase A |
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| Protein accession | YP_283392 |
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| Protein GI | 71905805 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTCT TGTTGTTAGT GGACGGTTCG TCCTATCTCT ACCGCGCTTT CCATGCCCTG
CCCGACCTGC GCAACAAGGC CGGCGAGCCG ACGGGCGCCA TCTACGGCGT TCTGAACATG
CTACGTCGTC TCGAGAGCGA CTACAAGGCA GAGTACAAGG CCGTCGTCTT CGACGCCAAG
GGCAAGACTT TCCGTGACGA CTGGTATCCC GAATACAAGG CGCATCGCCC GCCGATGCCC
GACGACCTGG TCCAGCAGAT CGAACCTCTG CATGCGGCGA TCAAGGCGGC TGGGTGGCCG
CTGCTGATGG TCGATGGCGT CGAAGCCGAC GACGTGATCG GCACGCTGGC CACCAACGCC
ACTGCCGACG GGATCGAGAC GCTGATATCC ACCGGCGACA AGGATCTGAC CCAACTGGTC
AGCTCGCATG TCCGCTGGTA CAACACGATG AGCAATGAAC TGCTCGACGA AGCCGGCGTT
GAAGCCAAGT TCGGCGTGCC GCCAGGCAAG ATCGTCGATT ATCTGGCGCT GGTCGGCGAT
ACCGTCGACG GCGTACCGGG TGTCGCCAAA TGCGGCCCGA AGACCGCTCT GAAATGGCTG
GCGCAATATG GCTCGCTCGA TGAAGTCGTC GCCCATGCCA ACGAGATCGG CGGCGTGGTC
GGCCAGAACC TGCGCGATCA CCTCGGTTTC CTGCCGCTCG GCAAGCGGCT GGTCACCGTG
GCTTGTGACC TCAGCAACCT GCCGGCGCCG AGCACCTTGA CCACCACCGC GCGAGACACG
GCAACCTTGC GCGAACTCTA TACCCGCTAC CAGTTCCGTA CCTGGCTGGG CGAAATCGAC
GGGCCGGAAG CGGCGGCGGC CGTGCCGGCG CGCGAAGTAT CGGAGACACC CGCCGCAGCA
CCGACCGCTG CCATCGCAGT CCATTACGAA ACCGTGTTGA GCTGGCCGCA ATTTGATGCC
TGGCTCGCGA AGATCGAAGC GGCGGAACTG ACGGCGCTCG ATACCGAAAC GACCAGCCTC
GACTCCTTCG CCGCCCGCAT CGTCGGCATC TCGCTGTCGG TCACGCCTGG CGAAGCCTGC
TACATCCCGC TCGCTCACAC CGCCCCCGGG GTCGCCGACC AGCTGCCACG CGAGGAAGTG
CTGGCCAGAC TGAAATCCTG GCTGGAGTCA GCCGCACACA AGAAGGTGCT GCAGAACGCC
AAGTACGACC AGCACGTCTT CGCCAACCAT GGCATCGCGC TGTCCGGCAT CGCCCACGAC
ACCATGCTGC AAAGCTACGT CATCGAGTCC GACAAGGGCC ACGACCTCGG CCAGCTATGC
ACCCGCCACC TCGGGCTCGC CACTATCGCT TACGAAGACC TGTGCGGCAA GGGCGCCAAG
CAGATCACCT TCGATCAGGT CGACATCGAA CGCGCTGCCA CTTACGCTGC CGAAGATTCC
GACGTCACGC TGCGCGTGCA CAACGTACTG CATCCGCAGT TCGCCAGCGA ACCCGGGCTG
TCACGCATCT ACCACGAGAT CGAAATGCCG GCCCGTCAGG TCATCTGGCA GATCGAGCGC
AACGGCATTC TGATCGACAG CGACGTTCTA AGCCGACAAA GTCACGAGAT GGGCCAGAAG
ATCATGGCCC TCGAAGCGCA GGCCTACGAA CTGGCCGGCC AGCCATTCAA CCTCGCCTCA
CCCAAGCAAC TGGCCGACAT CCTGTTCGAG AAGCAGGGCC TGCCGGTCAA GAAGAAAACC
CCCTCCGGCG GCCCGTCGAC CGACGAGGAA GTGCTCTCCG AACTGGCCCT CGACTACCCG
CTGCCCAAGC TGCTGCTCGA ACACCGCAGC CTGTCCAAGC TGAAAGGGAC CTACACCGAC
AAGCTGCCGC GCATGGTCAA TCCGCAGACA GGAAGAGTGC ATACTCACTT CTCCCAGGCA
GCTGTTGTGA CTGGCCGGCT CGCTTCCAGC GACCCCAATC TGCAGAACAT CCCGGTACGC
AGCGAGGAAG GCCGGAAGAT TCGTACGGCA TTCATTGCCC CGGCGGGTAG CAGCATCGTC
TCGGCCGACT ATTCGCAGAT CGAACTGCGC ATCATGGCCC ATCTGTCGGG CGACGAACGC
CTGCTCGACG CCTTCGCCCA CGGCGAGGAC GTGCACAAGG CCACAGCCGG CGAAATCTTC
GGCGTCACGC CGCTTGAAGT CGGCCCCGAC CAGCGCCGTG TCGCCAAGAG CATCAACTTC
GGGCTGATCT ACGGCATGAG CGCCTTCGGC CTGGCCCGCC AGCTCGGGCT GGAACGCAGC
GCGGCGCAGA CCTACATCGA CCGCTACTTC GCCCGCTACC CCGGCGTGGC CCGTTACATG
GAAGAAGCCC GCGAATCAGC CCGCCAGCAC GGCTACGTCG AAACCGCCTT CGGCCGCCGC
CTGTGGTTCC CGGATATCCG CTCGAGCAAC GGCAACCGCC GCCAGGGCGC CGAGCGCGCC
GCGATCAACG CGCCAATGCA GGGTACGGCC GCCGACCTGA TCAAGCTGGC CATGATCGCC
GTGCAAAACT GGCTGGAAAA ATCAGCGCTG AAATCACGTC TCATCCTGCA GGTACACGAC
GAACTGCTGC TCGAAGTACC GGACGGCGAA CTGATGGACG TCCGCACCCA CCTGCCGCGC
CTGATGGGAC AAGTGGCCGA ACTGAAGGTA CCGCTGGTCG TCGAAGTCGG CGTCGGGCCG
AACTGGGAAG CGGCGCACTA G
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| Protein sequence | MPLLLLVDGS SYLYRAFHAL PDLRNKAGEP TGAIYGVLNM LRRLESDYKA EYKAVVFDAK
GKTFRDDWYP EYKAHRPPMP DDLVQQIEPL HAAIKAAGWP LLMVDGVEAD DVIGTLATNA
TADGIETLIS TGDKDLTQLV SSHVRWYNTM SNELLDEAGV EAKFGVPPGK IVDYLALVGD
TVDGVPGVAK CGPKTALKWL AQYGSLDEVV AHANEIGGVV GQNLRDHLGF LPLGKRLVTV
ACDLSNLPAP STLTTTARDT ATLRELYTRY QFRTWLGEID GPEAAAAVPA REVSETPAAA
PTAAIAVHYE TVLSWPQFDA WLAKIEAAEL TALDTETTSL DSFAARIVGI SLSVTPGEAC
YIPLAHTAPG VADQLPREEV LARLKSWLES AAHKKVLQNA KYDQHVFANH GIALSGIAHD
TMLQSYVIES DKGHDLGQLC TRHLGLATIA YEDLCGKGAK QITFDQVDIE RAATYAAEDS
DVTLRVHNVL HPQFASEPGL SRIYHEIEMP ARQVIWQIER NGILIDSDVL SRQSHEMGQK
IMALEAQAYE LAGQPFNLAS PKQLADILFE KQGLPVKKKT PSGGPSTDEE VLSELALDYP
LPKLLLEHRS LSKLKGTYTD KLPRMVNPQT GRVHTHFSQA AVVTGRLASS DPNLQNIPVR
SEEGRKIRTA FIAPAGSSIV SADYSQIELR IMAHLSGDER LLDAFAHGED VHKATAGEIF
GVTPLEVGPD QRRVAKSINF GLIYGMSAFG LARQLGLERS AAQTYIDRYF ARYPGVARYM
EEARESARQH GYVETAFGRR LWFPDIRSSN GNRRQGAERA AINAPMQGTA ADLIKLAMIA
VQNWLEKSAL KSRLILQVHD ELLLEVPDGE LMDVRTHLPR LMGQVAELKV PLVVEVGVGP
NWEAAH
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