Gene Daro_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0160 
Symbol 
ID3569527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp175227 
End bp176366 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content62% 
IMG OID637678595 
Productglycosyl transferase, group 1 
Protein accessionYP_283389 
Protein GI71905802 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG CCGTATTCAA GGACTATGGG GTAGGGCGCT ATTTTGCCCA GTTGTTCGAT 
TCGATCCCGA ATACGACCTT CTTCCTGTCC GAAAAGAACA AGTCCGGACT CAACATCACG
CCGCACCGGG TGCATCTGCT GACCAAGAAA CAGCAGCTGC GCGACTACCT GAAGTCGCCG
CTCAAGGCCT GGCGCCGCCT GAAGGAAAAC GACAACGACA AGAAACGCGA TTTCTTCTAC
CTGGAAGTCG AACGCTCGGC CGCCGGCGGC GAGTTCGATG TCGCGCTGAC CGGGTCGGAT
CGCTCGTTGC ACACGCTGGC TTCGCTGAAG GCCAAGGGCC ACCAGTTCAA GCTGGTGTAC
TGGATTCCCT TCACCATCCC CTTCGTCGAC ATGTTCGATC CGCGTTCGCT GGCCATCCGC
CAGGCGGCCT TTCCGCAGGT CGACCTGTTC GTGGCGATCA CCGATACCTG CCGCCGCGTG
CTGCTGCTCG AAGGGATACC CGCAGAGAAG ATCGTCCACG TCTATCCCGG CGTCGATACC
GAGGTCTTCC AGCCGCGTCC GCCGCCGGCG AAGGATGATG TGTTCCGTAT CCTGTTCGTC
GGCAAGCTGG TCAGTTGGAA GGGTTGCTAC ACCTTGCTCT ACGCGGCCAA GGAGCTTCTT
TCGGAAATTC CCAATCTGGA ACTGATGTTC GTTGGCCAGG GCGCCCAGCG CCAGGGGTTG
GAGCAGGCGG CCGAACTGCT CGGCATCAAG GACCGGGTGA AGTTCACCGG TTTCCTGAAA
TACGACGCCT TGCCCGACAT CTACGCGCAA TCCGATGCCT TCGTGCTGCC GGCGTTGCCG
GCGATCAACC TGGCCGAGCA GTTCGGCTTC GTCGTCGCCG AGGCGATGGC CTGCGGGCTG
CCCACCGTGG TGTCGCGAGT TGGCGGTTTG CCCGAGGTCG TCGGCGAACG CGACGAGCTG
ATTTTCACGC CGGGCGATTT TTGGGATCTG GCCGCCAAGC TGCGGGCCAT CCACGCCTCG
CGCGAACTGG CGGCCGAGCT GGGGGCGCAT TGCCTGAACC ACGCGCGGAC CCATTACGAT
GCGCGCCAGA ATGGACTGGC GCTGAAGGCG GTGCTGGAAA AGATGGAGCA GGGGCAATGA
 
Protein sequence
MKLAVFKDYG VGRYFAQLFD SIPNTTFFLS EKNKSGLNIT PHRVHLLTKK QQLRDYLKSP 
LKAWRRLKEN DNDKKRDFFY LEVERSAAGG EFDVALTGSD RSLHTLASLK AKGHQFKLVY
WIPFTIPFVD MFDPRSLAIR QAAFPQVDLF VAITDTCRRV LLLEGIPAEK IVHVYPGVDT
EVFQPRPPPA KDDVFRILFV GKLVSWKGCY TLLYAAKELL SEIPNLELMF VGQGAQRQGL
EQAAELLGIK DRVKFTGFLK YDALPDIYAQ SDAFVLPALP AINLAEQFGF VVAEAMACGL
PTVVSRVGGL PEVVGERDEL IFTPGDFWDL AAKLRAIHAS RELAAELGAH CLNHARTHYD
ARQNGLALKA VLEKMEQGQ