Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0138 |
Symbol | |
ID | 3569544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 152017 |
End bp | 152919 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637678573 |
Product | periplasmic binding protein |
Protein accession | YP_283367 |
Protein GI | 71905780 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC GCATGAAAAT CCGCTTGCTT TCAGCCTTGG CGACCGCCTT CGTCGTTTCC ACCAACGCCC ACGCCGACCT CGTCATCAAG GATGACATCG GCCAGGAAAT CCGTCTCAAG GCCCCGGCCA AACGCATCGT TGCCCTCGCC CCCCACATCG CCGAGAGCCT GTATGCCGCG GGTGCCGGCG ACCGGCTGGT CGGTACCGTC GAATACAGCG ACTACCCGCC GGAAGCCAAG AAAGTGCCGC GGGTCGGCGG CTACTCGCGC GTCGACCTTG AGGCCATCGC GGCCCTCAAG CCTGATCTGG TCCTGGCCTG GGAGAGCGGC AACAACATGC CGCAGGTCGA CAAACTGAAG GGGCTTGGCC TGACGGTCTA TGTCTCACAG CCAAACAAGA TCGAAAACGT GGCCGACCAG CTGGTTCGCC TGGGCCAGCT GGCCGGCACC GAGCCCGCCG CCAATGCGGC CGCCGAACGT TTCCGTAAAC GGCTGGACGG CCTGCGCGCT GCCAACGTCG GCAAGCCGAA AGTACGCGTC TTTTATCAAA TCTGGAAAAC CCCGCTGATG ACGGTCGGCG GCCCGCAGAT CATCAGCGAT GCGATCAAGC TATGCGGTGG CGACAATATA TTCGGCCACC TCGCCAAGAT GGCGCCAACG GTCAGTGTTG AAGCCGTGCT CGAAGCCGAC CCCGAGGCCA TCATTGCCAC CGGCATGGGC GACGCCAAGC CGGAATGGCT GCACGACTGG GATAAATGGA CACGGATGAC GGCGGTCAAA CGCGACAACC TGTTCCACAT CAATCCGGAC ATCATGCAGC GCCATACGCC GCGCATCCTG GACGGCACCG AGAAACTTTG CGCCCACCTC GATGTCGCAA GAAGCCACCG CCCCGCCAAA TAA
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Protein sequence | METRMKIRLL SALATAFVVS TNAHADLVIK DDIGQEIRLK APAKRIVALA PHIAESLYAA GAGDRLVGTV EYSDYPPEAK KVPRVGGYSR VDLEAIAALK PDLVLAWESG NNMPQVDKLK GLGLTVYVSQ PNKIENVADQ LVRLGQLAGT EPAANAAAER FRKRLDGLRA ANVGKPKVRV FYQIWKTPLM TVGGPQIISD AIKLCGGDNI FGHLAKMAPT VSVEAVLEAD PEAIIATGMG DAKPEWLHDW DKWTRMTAVK RDNLFHINPD IMQRHTPRIL DGTEKLCAHL DVARSHRPAK
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