Gene Daro_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0111 
Symbol 
ID3569956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp127389 
End bp128390 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content59% 
IMG OID637678546 
Productrare lipoprotein A 
Protein accessionYP_283340 
Protein GI71905753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTT TTGTCGCCCC GTTGAGTCTT GCGCTGCTGC TTGCCGCCTG TGGCGGCCCC 
AGTCCGATTC GCGACACAAC GGTTGACGGG CAAAAAGGAT CTGTTTCAAA GTCGCCGACG
CCGACCAGGA AGCCGACAGC CGTCCTCAAA CGGGGTGGTG GTTTCTACAA GGATGACGGC
CCGGCGGAAG ACATTCCGGA CGGCCTCGAT GACATTCCCG ACGCCGAACC GAAGTGGGAA
CCACTGCACA AGCCGGCGAC CAAGCCCTAT GTCGTGCTTG GCAAGGAATA TGTTCCGAAC
ACCACCGTCA AGCCCTACAA GGCACGCGGT ATCGCCAGCT GGTATGGCAA GAAGTTCCAT
GGCCAGAAAA CCTCGATCGG CGAACCTTAT GACATGTTCG CGATGACCGC CGCCCACCCC
TCGCTGGCCC TGCCGTCCTA CGTGCGGGTA ACCAGCGTAC AGAGCGGCAA ATCAGTGGTC
GTCCGCATTA CCGACCGCGG CCCTTTTCAT GCCGACCGTG TCATCGACCT TTCCTACACT
GCCGCCTACA AACTTGGATT GATCAACGGC GGCAGCGGCC AGGTCGAAGT CGAAGCGATT
ATTCCAGGCG ACCTGGCCGG CACGACCTAT GCCCAGACCA CATCACCGCC CCGCGTCACC
AGTACCACGA ACGGGGACGA TATCGAACAG CTGGCCAAAC GCATGGCGCT CGAAGAACGG
CCGGTCCAAA CCGCAGTAAT GGCTGGCATG AGTGGCGATA CGGGCATACA AAAAGGGATT
TATCTGCAGC TTGGCGCCTT CTCAAATGTC GAGAACGCCG AAAATCTGAA AAATCACCTG
CTGCGCGAAC TCGACTGGCT GACCGAAACG ATGCGCGTCA ATCCAGGCAG CGGCATACAT
CGCCTGCATC TCGGCCCTTA TGCCAACCGC GGTGACGCTG ACCGGGTGGC CGAAAAAATC
AGCGCCGTAC TAGGCTTCCG ACCAACCGTC ATTACCCGTT AA
 
Protein sequence
MSRFVAPLSL ALLLAACGGP SPIRDTTVDG QKGSVSKSPT PTRKPTAVLK RGGGFYKDDG 
PAEDIPDGLD DIPDAEPKWE PLHKPATKPY VVLGKEYVPN TTVKPYKARG IASWYGKKFH
GQKTSIGEPY DMFAMTAAHP SLALPSYVRV TSVQSGKSVV VRITDRGPFH ADRVIDLSYT
AAYKLGLING GSGQVEVEAI IPGDLAGTTY AQTTSPPRVT STTNGDDIEQ LAKRMALEER
PVQTAVMAGM SGDTGIQKGI YLQLGAFSNV ENAENLKNHL LRELDWLTET MRVNPGSGIH
RLHLGPYANR GDADRVAEKI SAVLGFRPTV ITR