| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0109 |
|---|
| Symbol | |
|---|
| ID | 3569954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 125273 |
|---|
| End bp | 126280 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637678544 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_283338 |
|---|
| Protein GI | 71905751 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCT TGCCCGATCT CGTTTGTCCG GCCGGCAGCC TGCCGGCACT CAAAGCCGCC
GTCGATAACG GCGCCGACAC TGTCTACCTC GGCTACAAAA ACGACACCAA TGCGCGCAAC
TTCGCTGGCC TGAACTTCGA CACCAAGACC ATGGCCGAAG GCATACGCTA CGCCCATGCC
AAGGGTCGCG AAGTACTGAT GGCGATCAAC ACCTTCCCGC AGACCGGCCG GGTCGCCGAT
TGGCACAAGG CCGTCGACGG TGCCGTTGAC CAGGGCGTGG ACGCCATCAT CCTGGCCGAC
ATCGGCCTGC TCGACTACGC CCGCCAGCGC CATCCGCAAC AGCGCCTGCA TCTTTCCGTG
CAGGGCTCGG CGACCAGCTA CGAAGCGATC AACTTCTGCC AGCGTGAATT CGGCATTCGT
CGCGCCGTAT TGCCGCGCGT GCTGACGCTG GCCCAGGTCG AACATGTGAT CAAGAACACC
ACAGTCGAAA TCGAAGTCTT CGGCTTCGGC AGCCTGTGCG TGATGAATGA AGGCCGCTGC
TGGCTGTCTT CCTACGCCTG CGGTGAATCC CCCAATACCG TCGGCGCCTG CTCGCCGGCC
AAGTACGTCA AATGGGACAA GAAGCCGGGC ACCATGGAAA CCCGTCTCAA CGGTGTCCTG
ATCGACCGTT TCGGCGACGA CGAGCCAGCC GGCTACCCAA CGCTGTGCAA AGGTCGCTTC
GACGTGCAGG GAGACACCTA TTACGCGCTG GAAGAACCGA CCAGCCTGAA CGTGCTGGAA
ATACTGCCGG ACATCATCAA GATCGGGGTC AAGGCCATCA AGGTTGAAGG CCGGCAGCGT
AGCCCGACTT ATGTTGCACA AGTCACCCGT ACGCTGCGTG CCGCGCTCGA TTCGCTCCGC
GATGGCAGCG AACGCTTCCA CGTAAAACCA GCCTGGCAGG CGGAGCTGTC CAAGGTTTCC
GAAGGCAGCC AGGCGACGCT CGGCGCCTAC AGCCGGCCAT GGCGCTAA
|
|---|
| Protein sequence | MSSLPDLVCP AGSLPALKAA VDNGADTVYL GYKNDTNARN FAGLNFDTKT MAEGIRYAHA
KGREVLMAIN TFPQTGRVAD WHKAVDGAVD QGVDAIILAD IGLLDYARQR HPQQRLHLSV
QGSATSYEAI NFCQREFGIR RAVLPRVLTL AQVEHVIKNT TVEIEVFGFG SLCVMNEGRC
WLSSYACGES PNTVGACSPA KYVKWDKKPG TMETRLNGVL IDRFGDDEPA GYPTLCKGRF
DVQGDTYYAL EEPTSLNVLE ILPDIIKIGV KAIKVEGRQR SPTYVAQVTR TLRAALDSLR
DGSERFHVKP AWQAELSKVS EGSQATLGAY SRPWR
|
|---|
| |