| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0040 |
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| Symbol | |
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| ID | 3567802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 45412 |
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| End bp | 48993 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637678469 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_283269 |
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| Protein GI | 71905682 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.802864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCTT CCAGCCAGAT TCCGGCTGAA GCCCTGGAAG AAGCGCTAAT GATCGCTGGG
GTGGGGTGCT GGTCATGGCA CACCGAAACC CGGCAGTTTA GGATCTCGCG CAATTTTCAC
AGCCTGCTGG GCTACAGTCC GGATGCGCTG CCGGAAACCC CTGAGGCCTG GCTAGCGCTG
GCACATGCCG ATGAGCGGCC GCAACTGAGC ACGCTGTTCG CAAGACTGAG CGCGAATACC
GCTCGCGGCT ACCCACCCTT CACCTTGCGC CTGAAGCATA CCAATGGCCT GTGGCACTGG
TTCGAGGTAC GAACCCCGTG CACTGGCACG GGAGATGGTG CCGCACCGCT TGTTATCACC
TTCAACGAGA TCACCCAGCA AAAGCAGGCC GAGGCTGCGC TACGCGACAG TCAGCTGCGC
TTTCGGGCGC TCTACAACAC CTCTCCCCTC GCCTTCATTC TGTGGGACCG GCAGGGCCAT
ATTACCGAAT GGAATCGCCG GGCCGAGCAG ATGTTCGGCT GGAAGGCCGC TGAAGTCATC
GGCAAGCAGG TACACCACCT TCTGCTATCA ACCGAGCACC ACGAGGCCTT TGCCGATACG
GTTCGCGCGG TCATGCACGG CACCGGTACG GGTAAATTTA CCGGCCCGGC GCATGGCAAG
GACGGCGTGC TGCTTGTCTG CAACTGGTAC AACGTTGCCT TGCGGACAGC ACAAGGCAAG
TTGGTCGGCA TCCTGTCGCT GCTGCTCGAC ATCACCGAAG AGCGCCTGAC TCACCAGCGC
ATCGAGAAAA GCGAGAAGAT CTATCGGACG CTGGTGGAAA CCTCGCCCGA TGCCATCCTG
CTCCTCGGCC TCGATGGCGG CCTGAAAACG GCCAACCAGC AAGCCCACCG CCTGTTCGGG
CTCGACGAAA TGCTTGATCT CGACTCAACC AATGTTCGCG ACCTGCTGCC AGATAACGCA
AGTACCGAGC ACTTCCTCGA CGACCCTGAA GATTTCAACG GCTTCATCGT CACCCGCCAG
TTGTCGATGC AACGCCTAGA TGGCGGTCGC TTCGATGCTG ACACAGCATT TACCACGATC
ATGGACTCGA CCGGGCAGCC CACCGGCATT GTCCTCTTCG CCCGCGACGT TACCGGAAAA
CTGCAAGCTG AACGCGAGCT GGAGGCGCAT CGCGAAGACC TTGAACGTCT GGTTCAGGAG
CGAACCTACG ACCTCGAAAA TGCCCACGAC ACCTTGGCCA AGATCATCGA TGGCAGTCCG
GTACCCACCC TGGTGCTCGA CGCGGATCAC AAGATCACGC ACTGGAACGA AGCCTGCGAA
CAAATCATCG GCGTCAAGGC TGGCGATATC GTCGGAACAA GCAACCAGTG GAAGGCCTTC
TATCCATCTC AGCGCCCGAT CATGGCCGAT CTCGTGCTCA ACGGTGAAAT GGCGCAGATT
CAGGCACTGT ATTCCGATAA ATACCGGCGA TCCAGGCTCG TACAGGGCGG TTACGAAGCG
GAAGATTTCT TCCCCATGTT CAAGCGCTGG CTATTCTTCA CCGCCGCCCC CTTGTACGAC
AAGCAGGGCA GGATCGTCGG CGCCATCGAA ACCCTGCAAG ACATCACGGA ACGCAAACAG
GCCGAAATTG CCCTGACAGA AGCCAAGCAC GCAGCCGAAG CGGCCGCTGA AGCCAAAGCG
GCATTCCTGG CCAACATGAG CCACGAAATC CGAACGCCGA TGAATGCCGT CATCGGCCTC
GCCCACTTGC TGCTCAAGGG CGACCTTTCG GGCAAGCAAC GTGACTACAT TTCCCGCATT
CACGGTTCCG GGCAAATGCT GCTTGGGTTG ATCAACGACA TCCTCGATTT CTCGAAGATC
GAAGCCGGAC GGATGGTGCT GGAGGAAACC GAATTCGCGC TCGACGATGT GCTCGATAAC
GTCACCAGCG TTCTGCTGCA TCGGGCCCAG GAAAAGGGCC TGATCATGCA ATATGTGGTC
GAACCCGATG TCCCGACAAA TCTGCTTGGC GACCCGCTGC GCCTCGCCCA GATCCTGATC
AACCTGCTCG GCAATGCCTT GAAATTCACC GCCAGCGGCT CGATCACCGT TTTCGTTCGC
CGCCTGCCCG GAAATACCGC GCGCGCCGAA CTGGAAATCG ATGTCCAGGA CACTGGAGTC
GGCATGTCAC AGGAGCAGCA GCAAGTCCTG TTTCAGGCCT TCAGCCAGGC CGACTCGTCA
ATTACCCGAA AATATGGCGG CACGGGCCTT GGCCTGACCA TCTGCAAGCG GCTGGCCCAA
CTGATGCGGG GCGATATCTG GGTGACCAGC CAATCAGGTG TCGGCAGCAC CTTCACGTTC
ACCGTAAACC TGGGCCTGAG TACGCTCGAA GCCAACCCGC CGCTCAGCGC GATGCGTCGC
GCATTGGTCG TCGACGATAG CCCGCTGGCT CGCGCCATCC TCATCCGTCT ACTCGAAAAA
CACGGCTATT CGGCGATTCC GGCCGAATCC GGAGCAGAGG CCTTGGGCCT GCTCGCCGAT
ACGAGGACAG CCCCCTTCGA ATTCGTCACC ATCGATTTCA ATATGCCGGG CATGGACGGC
CTTGAACTGT CCGAGGCCAT CCGCAACCAG ATATCACCGT GCCCTCGACT GGTCATGGTC
ACCGCCAGCG ATACGGCCGC CCTGGGTAGC GATGAACGCC TGCACTGCGT CGATGCCGTG
CTCAGCAAGC CGGTAACGGC CGCCCAGATC GGCAAGCTGG TCAGGGACCG GGAATTGCAG
AATCACGCCA AGCCAAATGC ACCGGCACCA CTGGCCGGCC TCCGTATCCT GCTGGTCGAC
GACATGCCGA CCAATCTGCT GATCGCCGGT GAAATGCTTG AATCCTTCGG CATCACTGTC
GATACTGCCG ACAATGGCGT GCTTGCCTTG AAAAAAGTAA TCGACGAAGG TAACGACTAC
GATATCGTGC TAATGGACAT CCAGATGCCG GAAATGGACG GCCTGGAAGC CACCCGCCGC
TTACGTGCCG TTGAGCGCAG CCAGAGTCTG CCGATCATCG CCATGACGGC AAATGCACAA
GATTCCGAAC GCCAACGCTG CCTGGCGGCT GGCATGAATG ATTTTCTGAC CAAACCGATC
GATCCAGGCT TGCTGCAAGA CACGCTTTTC CGCTGGCGCC CCCGGCAAGA CACAACTGCT
CCAACAAGAA AACAGGAGAC GATTCCCATG ACACCCGCCG ATGGACTGCC GGATCTTCCT
GGCATAAATA CAGCAGAAGG CCTCAGACGA ATGATGAACA AGCCTTCGCT TTACGAAAAG
GTATTGCGCG ATTTCCACGC CCGCTTCACT GACGAGGCCA AAGCCATCCG GGCAGCCATT
TCGGCTGGTG ATTTTTCGAC GGCTGAACGC CGGGCCCACA GCACCAAGGG ACTAGCCGGC
ACGATCGGCG CGGTGGGACT ACAAAATGCT GCCCTGAACC TCGAACAGGC ACTCCACAAT
GGCGAGGCGG CGCTGGAATC CATTTTTGAT CAGTTCGAAA ACGAACTGAG CATCGTCATC
GGCAGTATCG CCCGCGCCTT CGGCATTGAT CTGGCCGGTT GA
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| Protein sequence | MAPSSQIPAE ALEEALMIAG VGCWSWHTET RQFRISRNFH SLLGYSPDAL PETPEAWLAL
AHADERPQLS TLFARLSANT ARGYPPFTLR LKHTNGLWHW FEVRTPCTGT GDGAAPLVIT
FNEITQQKQA EAALRDSQLR FRALYNTSPL AFILWDRQGH ITEWNRRAEQ MFGWKAAEVI
GKQVHHLLLS TEHHEAFADT VRAVMHGTGT GKFTGPAHGK DGVLLVCNWY NVALRTAQGK
LVGILSLLLD ITEERLTHQR IEKSEKIYRT LVETSPDAIL LLGLDGGLKT ANQQAHRLFG
LDEMLDLDST NVRDLLPDNA STEHFLDDPE DFNGFIVTRQ LSMQRLDGGR FDADTAFTTI
MDSTGQPTGI VLFARDVTGK LQAERELEAH REDLERLVQE RTYDLENAHD TLAKIIDGSP
VPTLVLDADH KITHWNEACE QIIGVKAGDI VGTSNQWKAF YPSQRPIMAD LVLNGEMAQI
QALYSDKYRR SRLVQGGYEA EDFFPMFKRW LFFTAAPLYD KQGRIVGAIE TLQDITERKQ
AEIALTEAKH AAEAAAEAKA AFLANMSHEI RTPMNAVIGL AHLLLKGDLS GKQRDYISRI
HGSGQMLLGL INDILDFSKI EAGRMVLEET EFALDDVLDN VTSVLLHRAQ EKGLIMQYVV
EPDVPTNLLG DPLRLAQILI NLLGNALKFT ASGSITVFVR RLPGNTARAE LEIDVQDTGV
GMSQEQQQVL FQAFSQADSS ITRKYGGTGL GLTICKRLAQ LMRGDIWVTS QSGVGSTFTF
TVNLGLSTLE ANPPLSAMRR ALVVDDSPLA RAILIRLLEK HGYSAIPAES GAEALGLLAD
TRTAPFEFVT IDFNMPGMDG LELSEAIRNQ ISPCPRLVMV TASDTAALGS DERLHCVDAV
LSKPVTAAQI GKLVRDRELQ NHAKPNAPAP LAGLRILLVD DMPTNLLIAG EMLESFGITV
DTADNGVLAL KKVIDEGNDY DIVLMDIQMP EMDGLEATRR LRAVERSQSL PIIAMTANAQ
DSERQRCLAA GMNDFLTKPI DPGLLQDTLF RWRPRQDTTA PTRKQETIPM TPADGLPDLP
GINTAEGLRR MMNKPSLYEK VLRDFHARFT DEAKAIRAAI SAGDFSTAER RAHSTKGLAG
TIGAVGLQNA ALNLEQALHN GEAALESIFD QFENELSIVI GSIARAFGID LAG
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