Gene Daro_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0032 
SymbolhemE 
ID3567794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp37182 
End bp38249 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content59% 
IMG OID637678461 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_283261 
Protein GI71905674 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.590696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGAC CCAAGAACGA TACTTTCCTG CGTGCCCTTC TCAAAGAGCC GACCGAATAC 
ACACCGCTGT GGCTGATGCG CCAAGCGGGG CGTTATCTGC CCGAGTACTG CGAAACCCGT
AAACGGGCTG GCAATTTCCT GAATTTGTGC AAATCGCCGA CGATGGCCTG CGAGGTCACG
CTGCAGCCGT TGGCCCGCTA CGACCTCGAT GCCGCCATCC TGTTCTCCGA CATCCTGACC
GTGCCCGATG CAATGGGGCT TGGGCTGTAT TTCGCCGAAG GCGAGGGCCC CAAGTTCGAG
CGCCCGCTGC GCGAAGAATG GGCGATCAAC AACCTGACGG TGACCGATCC CTATGAGCAT
CTTGGCTACG TGATGGATGC CGTGTCAGAG ATTCGTCGTG CGCTGGACAA CTCCGTTCCG
CTGATCGGCT TCTCCGGCAG CCCCTACACG CTGGCCTGTT ACATGGTCGA AGGCGAGGGC
TCCAGCGATT TCCGCAACAT CAAGGCCATG CTCTACAACC GGCCGGACCT GCTGCACCGC
ATCCTGTCGG TGACCGCTGA TTCCGTGATC GCCTATCTGA ATGCCCAGAT CGATAGCGGT
GCGCAAGCGG TGATGATCTT CGATACCTGG GGAGGCTCGC TGTCCAATGC CGCCTACGAG
GAGTTCTCGC TGCAATACAT GCGTCGCATC GTGGCTGGCC TGAAGAAGGA AAAGGACGGT
CAGCGCATTC CGAGCATCGT GTTCACCAAG AACGGTGGTC TGTGGCTGGA AAAGATTGCC
GATATCGGCT GCGATGCTGT TGGCCTCGAC TGGACGATCG ACATTGGCGA AGCTCGCCGT
CGCGTCGGTG ACAAAGTGGC TTTGCAGGGC AACCTGGATC CGAACGTCTT GTTTGCTCAG
CCGGAAATCG TTGCTGCCGA AGCGAAAAAA GTGCTCGACA GCTTTGGCCC GGCCAATACT
GGCCACGTTT TCAACCTCGG CCACGGCATT TCGCAATTCA CACCACCGGA AAGCGTGACT
GCGCTGGTTG AAGCGGTTCA TTCGCACAGT CGGCTATCAC GTAAGTGA
 
Protein sequence
MSRPKNDTFL RALLKEPTEY TPLWLMRQAG RYLPEYCETR KRAGNFLNLC KSPTMACEVT 
LQPLARYDLD AAILFSDILT VPDAMGLGLY FAEGEGPKFE RPLREEWAIN NLTVTDPYEH
LGYVMDAVSE IRRALDNSVP LIGFSGSPYT LACYMVEGEG SSDFRNIKAM LYNRPDLLHR
ILSVTADSVI AYLNAQIDSG AQAVMIFDTW GGSLSNAAYE EFSLQYMRRI VAGLKKEKDG
QRIPSIVFTK NGGLWLEKIA DIGCDAVGLD WTIDIGEARR RVGDKVALQG NLDPNVLFAQ
PEIVAAEAKK VLDSFGPANT GHVFNLGHGI SQFTPPESVT ALVEAVHSHS RLSRK