Gene Daro_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0017 
Symbol 
ID3570041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp21218 
End bp22132 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID637678446 
ProductLysR family transcriptional regulator 
Protein accessionYP_283246 
Protein GI71905659 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.163482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CCGAAATGCG CTACATCGTG GCTCTGGCCC GTGAGCGGCA TTTCGGCAAG 
GCGGCCGATG CCTGCCACGT CAGCCAGCCG ACGCTGTCGG TGGCGTTGAA GAAGGTCGAA
GGCCAGATCG GTGCCCCGCT TTTCGAGCGC GGCACCAACG ATGTTCGCAT CACGCCGCTG
GGCGAGCGTA TCGTTGCCCA AGCCACGCGC GTGCTGGATG AGGCGGTCAA GCTGGAAGAA
ATCGCCGAAG CAACCGGCGA TCCGATGACC GGTCAGTTGC GCGTCGGTAT CATCTACACC
ATTGCACCGT ACTTGCTGCC GCAACTGATC CCGGCTCTCA ATCGCGAGGC GCCGAAAATG
CCGCTCTTCC TCAAGGAAGA CTTCACCGGC AACCTGATTC CCGCGCTGAA GGCCGGCGAA
CTTGACGTTA TCGTCATCGC ACTGCCGTTC AGCGAACCGG GCCTGGTTGC TCAGCCGGTT
TACGACGAAC CGTTCAGGGT GGTTGTTCCG GCTACCCATC CATGGTCGTC TCGCACTGAT
GTCAATGGCG ATGAGCTGGA TGGCCAGAAC CTGCTGCTGC TCGGCCAAGG CAATTGCTTC
CGCGATCAGG TGCTCGAATC CTGCCCCCGC CTGAATGCGC CGGATGCCCT GGAACACTCG
CTCGAAGGCA GTTCGCTTGA AACCATCCGC TACATGGTGG CCAGCGGTGC CGGTGTGGCG
GTCATGCCCA GTACCGCCGC CGATCCACTG ATCACCAAGG AACCGCTGGT CAAGGTCTTG
CCTTTTGCCG GAACCCAACC CAAACGCACC GTCGGCCTGG TTTGGCGCAT CACCTTCCCG
CGGCCGCAAG CGATCGATGC CGTCCGCGCC GCGCTGTTGT CCTGCCAGCT ACCGGGGGCC
TTGGCCGTGC GTTGA
 
Protein sequence
MTLTEMRYIV ALARERHFGK AADACHVSQP TLSVALKKVE GQIGAPLFER GTNDVRITPL 
GERIVAQATR VLDEAVKLEE IAEATGDPMT GQLRVGIIYT IAPYLLPQLI PALNREAPKM
PLFLKEDFTG NLIPALKAGE LDVIVIALPF SEPGLVAQPV YDEPFRVVVP ATHPWSSRTD
VNGDELDGQN LLLLGQGNCF RDQVLESCPR LNAPDALEHS LEGSSLETIR YMVASGAGVA
VMPSTAADPL ITKEPLVKVL PFAGTQPKRT VGLVWRITFP RPQAIDAVRA ALLSCQLPGA
LAVR