Gene Daro_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0013 
Symbol 
ID3570037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp17619 
End bp19241 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content59% 
IMG OID637678442 
ProductABC transporter related 
Protein accessionYP_283242 
Protein GI71905655 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.189304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGTCG CCGCCAATAT CACCATGCAG TTCGGGGTCA AACCCCTTTT CGAAAATGTT 
AACGTCAAGT TTGGCGAGGG TTATCGCTAC GGCCTGATCG GTGCCAACGG CGCCGGAAAA
TCAACCTTCA TGAAGATCCT GTGCGGCGCG TTGGAACCTT CTGCCGGCAA TGTCTCGAAA
GACAAGCACG AGCGCATGGC CTACCTGAAG CAGGACCAGT TCGCCTACGA AGACATGCGC
GTGCTCGACG TCGTGCTGAT GGGCCACGAG GAAATGTGGG CCTGCATGAG TGAGCGCGAC
GCCATTTACG CCAATCCGGA AGCAACGGAA GACGACTACA TGAAGGCAGC CGATCTCGAG
CATCAGTTCG GCGAACTGGA TGGCTACACG GCTGAATCCC GCGCTGGCGA ATTGCTGCTT
GGCGTCGGCA TCCCGACTGA ACAGCACAAC GGTCCGATGA GCGAAGTGGC CCCCGGCTGG
AAGCTGCGTG TGCTGCTCTG TCAGGCCCTG TTCGCCAATC CGGACATCCT GTTGCTCGAC
GAACCGACCA ACAACCTCGA CATCAACACC ATTCGCTGGC TGGAAGACGT GCTGAACAAT
CGTGATTCGA CGATGATCAT CATCTCGCAC GACCGTCACT TCCTGAACCA GGTCTGTACT
CACATGGCTG ACCTGGACTA CGGCAAGATC ACGACCTACG CCGGCAACTA CGACGATTTC
ATGGAGGCTG CCCAGCAGGC CCGCGAACGT CTGTCCAACG CCAACGCCAA GGCCAAGGAA
CGCATCGCCG AACTGCAGAC CTTCGTCCGC CGCTTCTCGG CCAACGCGTC CAAGGCAAAG
CAGGCAACCA GCCGGATGAA GCTGATCGAC AAGCTGAAGC CGGAAGACGT CAAGCCATCG
TCGCGTCAGT ACCCGTGGAT TCGTTTCGAC TACGACGAAA AGGCCAAGCT GCACCGTCAG
GCGGTCGAGA TCGAGAATGT TTCCTTCACC TACGAAGGTG GCGAGCGCAA GATCTTCAAT
AACCTGACGC TGACCATCAA CGCCGGCGAG AAGATTGCCG TGATCGGTGA GAACGGTGTC
GGTAAGACCA CGCTGTTGAA GCTGCTGATG GGTGAAGTGA CGCCGCAATT CGGCACGATC
AAATGGGCTG AAAAGGCTTA CCCGGGCTAC TACGCGCAGG ACCACAGCGC CCAGTTCGCC
GGCACCGAAA GCCTGACCGA CTGGATCGCC GGCTATGCCC GCGCCACCAT CGAGGACGGT
GGCGACCTCG AAACCCTGAT TCGCGGCACC CTGGGGCGTT TGTTGTTCTC CGGCGACGAA
GTCAAGAAGC CGGTCAACGT CATTTCCGGC GGTGAGCAGG GGCGCATGCT GTTCGGCAAG
CTGATGCTAT CGAAACATAA CGTGCTGCTG ATGGACGAGC CGACCAACCA CCTCGACATG
GAATCGATCG AAGCCCTGAA CAGTGGCCTG GAAAAATTCC CCGGCACGCT GGTCTTCGTC
TCCCATGACC GGGAGTTCGT CTCTTCGCTG TCCACCCGCG TGCTCGAGGT GAAGAGCGAC
GGCCGTATCG TCGATTACCT TGGTGGCTAC GAGGATTATC TGGCCAGCCA GGGCGTCGAA
TAA
 
Protein sequence
MLVAANITMQ FGVKPLFENV NVKFGEGYRY GLIGANGAGK STFMKILCGA LEPSAGNVSK 
DKHERMAYLK QDQFAYEDMR VLDVVLMGHE EMWACMSERD AIYANPEATE DDYMKAADLE
HQFGELDGYT AESRAGELLL GVGIPTEQHN GPMSEVAPGW KLRVLLCQAL FANPDILLLD
EPTNNLDINT IRWLEDVLNN RDSTMIIISH DRHFLNQVCT HMADLDYGKI TTYAGNYDDF
MEAAQQARER LSNANAKAKE RIAELQTFVR RFSANASKAK QATSRMKLID KLKPEDVKPS
SRQYPWIRFD YDEKAKLHRQ AVEIENVSFT YEGGERKIFN NLTLTINAGE KIAVIGENGV
GKTTLLKLLM GEVTPQFGTI KWAEKAYPGY YAQDHSAQFA GTESLTDWIA GYARATIEDG
GDLETLIRGT LGRLLFSGDE VKKPVNVISG GEQGRMLFGK LMLSKHNVLL MDEPTNHLDM
ESIEALNSGL EKFPGTLVFV SHDREFVSSL STRVLEVKSD GRIVDYLGGY EDYLASQGVE