| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0002 |
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| Symbol | |
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| ID | 3570026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1758 |
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| End bp | 2864 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637678431 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_283231 |
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| Protein GI | 71905644 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00000008266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00275233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTCTTA TTAAAACCCA AAGAGACACG CTTCTGGCCC CGCTGCAGTC TGTGTCGGGA
ATTGTCGAAC GTCGTCATAC GCTGCCTATC CTGTCCAACG TGCTGCTGGA GAAGAAGGGC
GACCGCCTGA CCCTGTTGGC GACCGACATT GAGATCCAGA TCACCACCTC GACGGAATGT
GCCGGTGGTG AGGGTGATGG CGCGGTCACT GTGGGTGCTC GCAAGATGCA GGAAATCCTG
CGTTCGCTGC CGGATACTTC TGAAGTCAGC CTGGTCCTGG AAGACAAGCG TTTGCAGGTG
CGTGCCGGCA AGAGCCGCTT CAGCCTGCAG ACCCTGCCGG CCGACGATTT CCCGCGCATG
ACCATGAGCG AAGGCGAAAC CAAGCAGTTT TCGATTTCGC AAAAGGCGTT CCGTCAGCTG
ATCAGCAAGA CTCAGTATTC GATGGCAGCG CAGGACGTAC GCTACTACCT GAACGGCTTG
CTGCTACTGG TCGAAGGCAA GGAACTTCGC GCTGTCGCAA CCGACGGTCA CCGTCTGGCC
TACGCCAGCG TCGAGATCGA TACCGACCTG CCGCGTCAGG AAATGATCCT GCCGCGCAAG
ACGGTGCTCG AACTGAACCG CCTGCTGGTC GATACCGATG ATCTGCTGAA CATCACGCTG
ACGCCGAATC AGGTTCGCTT CTCGTTCGGG TCCGTGGTGC TGGTTTCCAA GCTGATCGAT
GGCAAGTTCC CGGACTATGA GCGTGTCGTG CCGGCCACCT TGAAGAACCA CATGAAGGTT
GGCCGCCAGA CGTTGATGCA GGCCATGCAG CGCGCCGCCA TTCTGACCAA CGAAAAATTC
CGTGGCGTTC GCGTCGTGCT TGGCGACAAC AGCCTGAAGT TGATCGCGGC CAATGCCGAA
CAGGAAGAAG CCGTAGAAGA AATCGAAGTT GATTACACCG GTGATGTCAT CGATGTTGGC
TTCAACGTCG GTTATCTGTT GGATGTGCTG AACAACATCC ACGCCGATGA AATCCAGTGG
AGTTTCAACG ACGCCAATTC CAGCGCCCTG ATCACCTTGC CTGGCAACGA CCGCTTCAAA
TACGTCGTGA TGCCGATGCG TATCTGA
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| Protein sequence | MILIKTQRDT LLAPLQSVSG IVERRHTLPI LSNVLLEKKG DRLTLLATDI EIQITTSTEC
AGGEGDGAVT VGARKMQEIL RSLPDTSEVS LVLEDKRLQV RAGKSRFSLQ TLPADDFPRM
TMSEGETKQF SISQKAFRQL ISKTQYSMAA QDVRYYLNGL LLLVEGKELR AVATDGHRLA
YASVEIDTDL PRQEMILPRK TVLELNRLLV DTDDLLNITL TPNQVRFSFG SVVLVSKLID
GKFPDYERVV PATLKNHMKV GRQTLMQAMQ RAAILTNEKF RGVRVVLGDN SLKLIAANAE
QEEAVEEIEV DYTGDVIDVG FNVGYLLDVL NNIHADEIQW SFNDANSSAL ITLPGNDRFK
YVVMPMRI
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