Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0001 |
Symbol | dnaA |
ID | 3570025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 151 |
End bp | 1548 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637678430 |
Product | chromosomal replication initiation protein |
Protein accession | YP_283230 |
Protein GI | 71905643 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000010295 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.002869 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGGTT TCTGGGAATC CTGTTTGCAG CGCTTCGAGC AGGAATTGCC CGCGCAACAA TTCAATACCT GGATCAAGCC GCTCCGGCTC GAAGGTGAAT CCACAGCCCT GGAAGATGGC CTGCGCCTGA TTGCGCCCAA TGGTTTCATC CTGAAGTGGG TGCGCGACCG TTACCTGACA CGGATCGAAG ACTACAGTCG CACCTTCTTT GAAGGTCCGG TCACCATTGC GCTGGTCATC GGCAGTGGCA AGGCGACAGC CGCCAGAATT CAAGCAACAA CGACTGATTC AGGCCAAAAT GCACCGGCCA ATCCGGCGAC TACCTCGGAA AAACGGACTG CCGCCTCGGA AAAGGCGCGG GGCAAGGGTA GCAATTACGA AAAGTCCCGG CTCTTTCCGT CATTCACCTT TGACAATCTG GTGGTTGGCA AGGCCAACGA TCTGGCCCGT GCCGCAGCCG TCCAGGTCGC CAATAATCCG GGTGGAGCCT ACAACCCGCT GTTTATCTAT GGCGGGGCTG GCCTCGGCAA GACTCACCTG ATTCACGCGA TTGGCAACAC CATCGCCACC GAGAATCCGG AAAAGATCGT TCGTTACGTA CATGCGGAAG ATTATTACTC CGACGTTGTT CGGGCCTATC AGCAGAAGTC TTTCGATAGT TTCAAGCGGA CTTACCGCTC ACTTGATGTG CTGCTGCTGG ACGATGTGCA GTTCTTTAAT GGCAAGAACC GTTCACAGGA AGAGTTCTTT TTCCTGTTCA ATGCGCTGAT TGAGGCCCGC AAGCAGATCA TCATCACCTG CGATACCTAT CCCAAGGATA TCAACGGCCT TGACGACCGT CTGGTCACCC GTTTCGACTG GGGGCTGACC GTACAGATCG AACCGCCGGA ACTGGAAATG CGGGTCGCCA TTCTGAAGAA GAAGGCGGAA GCTGAAGGTA TCCAGCTCGA TGACGAAGTT GCCTTCTTTA TTGCCAAGCA CCTGCGTTCC AATGTTCGCG AGCTGGAAGG TGCCCTGAAG AAGGTGCTGG CCTATTCTTC CTTCCATGGT CGCGTTATTG CGCTGGACCT GGCCAAGGAA GCCCTGAAGG ATGTCATCGG CTCCGTGCGC AATGTGGGCA TGGACAACAT CCAGAAGACC GTTGCCGACT ATTACAAGAT CAAGGTTGCC GAGTTGTTCT CCAAGAAGCG CACACGCGCC ATTGCCCGGC CACGTCAGGT TGCCATGTGG CTATGCCGCG AAGTGACCTC GCACAGTTTT CCGGAAATCG GCGATGCCTT CGGTGGGCGT GATCACACCA CGGTCATTCA TGCAGTAAAA ACGATCGATT CCCTGCGCAT CAAGGAAAAC GAACTCAATC ACGACCTGCA TGTTTTGCTG CAAGTATTGA AAGGATGA
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Protein sequence | MSGFWESCLQ RFEQELPAQQ FNTWIKPLRL EGESTALEDG LRLIAPNGFI LKWVRDRYLT RIEDYSRTFF EGPVTIALVI GSGKATAARI QATTTDSGQN APANPATTSE KRTAASEKAR GKGSNYEKSR LFPSFTFDNL VVGKANDLAR AAAVQVANNP GGAYNPLFIY GGAGLGKTHL IHAIGNTIAT ENPEKIVRYV HAEDYYSDVV RAYQQKSFDS FKRTYRSLDV LLLDDVQFFN GKNRSQEEFF FLFNALIEAR KQIIITCDTY PKDINGLDDR LVTRFDWGLT VQIEPPELEM RVAILKKKAE AEGIQLDDEV AFFIAKHLRS NVRELEGALK KVLAYSSFHG RVIALDLAKE ALKDVIGSVR NVGMDNIQKT VADYYKIKVA ELFSKKRTRA IARPRQVAMW LCREVTSHSF PEIGDAFGGR DHTTVIHAVK TIDSLRIKEN ELNHDLHVLL QVLKG
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