| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2140 |
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| Symbol | ribE |
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| ID | 3516128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2642977 |
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| End bp | 2643648 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670856 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_265421 |
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| Protein GI | 71066694 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00256216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTACTG GAATCATAGA AAGTGTTGGA AAGGTTAAGT CGATGCAACC TACAGGCGGC
GACATTCGCT TGACCATAGA GTCTGATGGC TTAGATTTCA GCGATGTGAA GCTGGGCGAC
TCGATTGCTT CTAATGGTAT CTGTCTGACG GTTGTAGATT TTGGTAGTAA CCATTACTCT
GTTGATGTTT CACGTGAAAC TATAGCGCGA ACAGCATTAA AGGATTTGAA GCCAGGTCAT
ATTGTGAACT TAGAGAAGGC GATGCTACCT ACCACGCGTT TCGGTGGGCA TATTGTCGCA
GGGCATGTCG ATGGAGTAGG GGTTGTTAGT AAGCTGCAAA AGGATGCACG TTCTATTTAT
ATCGAAATTG AGATACCTGT AGAGCTTGCC CATTATACAG CGACTAAAGG CTCAATCACG
CTTGATGGTA TTAGCCTCAC CACCAATTTA GTACGCGATA ATATCGTCTC GCTCAACATC
ATTCCACATA CCGCGCAAGT GACCAATATT GCTCAGCATT GGCTGCTGGG ATCCAAGGTG
AATGTAGAGG TGGATATCGT GGCTAGATAT TTAGAGCGTT TATTAAATAA GTCGCAGGGA
GACACGAAAA ATAGCAGCCC GCAAAGCAGT ATTACCGAAG CTTTTTTAGC AGATAATGGC
TTTATGAGAT AA
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| Protein sequence | MFTGIIESVG KVKSMQPTGG DIRLTIESDG LDFSDVKLGD SIASNGICLT VVDFGSNHYS
VDVSRETIAR TALKDLKPGH IVNLEKAMLP TTRFGGHIVA GHVDGVGVVS KLQKDARSIY
IEIEIPVELA HYTATKGSIT LDGISLTTNL VRDNIVSLNI IPHTAQVTNI AQHWLLGSKV
NVEVDIVARY LERLLNKSQG DTKNSSPQSS ITEAFLADNG FMR
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