| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2138 |
|---|
| Symbol | |
|---|
| ID | 3516126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2640011 |
|---|
| End bp | 2641585 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_265419 |
|---|
| Protein GI | 71066692 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0103709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAAA CCAGCACTGC GCCAAGAAAC AATAAACTTA AACCGTCAAG CAACCTTATC
ATGAATGGTA GCGTTCGCGT TCGCGTCATT CGCACCTTAC TGGCGATTCA GAATGGCCAA
TCGCTAGCAA GCGTCCTTGA TCCGCTACTA AACAGTTTGC ATGACGGCGA TAAAGGTTTT
GCCCATGCAT TATTGCTAAC AACGTTGCGT CAATGGTACG CCCTTGAGCG CTTACTGGAT
AGTCTGGCTG ATAACTCCAT TGATGAAAAA GAAGTACGTA CTACTATTCA AGTGGGTTTG
ACGCAGCTGC TCTATTTGCA AGTAGCTGAT CATGCGGCGA TTCATGAAAC GGTTGAGGCG
GCAAAAGAAA TTGAGTTTGC TCATGCAACT GGTTTAATCA ATGCCATCTT ACGTAAAGTT
GCTAAAAACC CAAGTAAGTT CCGCAAGAAG TGCGATAAAA AACACAGCTT ACCTAATTGG
CTTGCTTATC AGCTTAAGCA AGATTGGAGT GAGCAGTATG ACGATCTGAT GCAGGGATTA
CGTCAACCTG CGCCGATGTT TTTACGCGTG AATACAGCGG TTACCTCGGT AGAGGACTAT
CAGCAAGCAT TGGTGGAGTT TGAGGTTGAA GCGGACTTGG TTGAGCTAAC GAGTGGTTTT
AACTTACCCA ACTCGCTGGA TGCAGCCACA TCTAAAACCA TATCAACCAA AGGCTTCAGA
TTACATCAAA GCACCGCAGT GAATGCCTTA CCTCAATTTG CTCAAGGGGC TGCTAGTGTA
CAAGATATGC ATGCTCAGCT TGCAGCGCCG CTTATCCATA GCGCTCTATT CAATAAGCTG
AGTGTTAAAA ACGATGATGC AGATGTCGAT ACAGACACGA ATAACAACGA GATCCGTATT
TTAGATGCTT GTGCAGCGCC GGGTGGTAAG CTTGCTCATT GGTTAGAAAT ACTTAGCTCA
AACGAGCAAT CACCTTTGTT TCACGTGAAA CAAGATGATG AATCAATACC TGCGGTTTCG
AAAGTGACGC TTACTGCGAT TGATAATGAA GCGCCGCGTA TCGAGCGTAT TTACGATAAT
TTACAGCGCT TGAACTTAAG TCAGCACGAC TTGCAGCAAG CTGAGAAAAA TATCGAACTC
AATATTGTCT GTGCTGACGC GACGACATGG CAAGGGGCCG GTAAGAAAAA GAGCAAACTT
GTATTTGACG CTATATTACT AGACTCACCT TGTACGGCGA CTGGCGTGAT TCGTCGTCAT
CCTGATATCA GTATCTTACG TACTGAAGAG GATGTGGAGC AAACGGCATT GTTACAAGCC
GATATCTTGC ACAATCTATG GCCACAACTT AAGGTTGGCG GCTATCTATT ATATGTCACT
TGCTCTATCT TAAAGCAAGA GAACGTCGAG CAAATGCAGG ATTTCATCAC TCACTATAGC
GATGCGGTAG CCATTGAATT TAGCGAAGAT TGCAATTGGG GTATCGCCCA AGCCATCGGT
CGTCAGTGCT TACCAATTGA TAGCGAGAGC GGCGATGGTT TTTACTATGC CTTGCTGCAC
AAAACTGCTG AATAA
|
|---|
| Protein sequence | MRQTSTAPRN NKLKPSSNLI MNGSVRVRVI RTLLAIQNGQ SLASVLDPLL NSLHDGDKGF
AHALLLTTLR QWYALERLLD SLADNSIDEK EVRTTIQVGL TQLLYLQVAD HAAIHETVEA
AKEIEFAHAT GLINAILRKV AKNPSKFRKK CDKKHSLPNW LAYQLKQDWS EQYDDLMQGL
RQPAPMFLRV NTAVTSVEDY QQALVEFEVE ADLVELTSGF NLPNSLDAAT SKTISTKGFR
LHQSTAVNAL PQFAQGAASV QDMHAQLAAP LIHSALFNKL SVKNDDADVD TDTNNNEIRI
LDACAAPGGK LAHWLEILSS NEQSPLFHVK QDDESIPAVS KVTLTAIDNE APRIERIYDN
LQRLNLSQHD LQQAEKNIEL NIVCADATTW QGAGKKKSKL VFDAILLDSP CTATGVIRRH
PDISILRTEE DVEQTALLQA DILHNLWPQL KVGGYLLYVT CSILKQENVE QMQDFITHYS
DAVAIEFSED CNWGIAQAIG RQCLPIDSES GDGFYYALLH KTAE
|
|---|
| |