| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2118 |
|---|
| Symbol | avtA |
|---|
| ID | 3516105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 2617101 |
|---|
| End bp | 2618432 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670833 |
|---|
| Product | valine--pyruvate transaminase |
|---|
| Protein accession | YP_265399 |
|---|
| Protein GI | 71066672 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT CAAAGTTCGG TCAAAAATTT ACCCAGCCCA CTGGCATCTC ACAATTGATG
GATGATCTTG GCGATGCACT AAAAAGTGAT CAGCCTGTTA ACATGCTGGG CGGTGGTAAC
CCTGCCAAAA TTGATGCCGT CAATGAGTTG TTTTTGGAAA CTTACAAGGC GCTTGGCAAT
GATAACGATA CGGGCAAAGC CAATAGTAGC GCTATTATTA GCATGGCGAA TTACTCCAAT
CCACAAGGTG ACTCTGCCTT TATCGATGCC TTAGTTGGCT TCTTTAACCG TCATTATGAT
TGGAATCTAA CCTCAGAAAA TATCGCCCTG ACCAATGGCT CACAGAATGC GTTTTTCTAT
CTGTTTAATT TATTTGGCGG TGCTTTTGTT AATGAGCACA GTCAAGACAA AGAAAGTAAA
TCTGTCGATA AGTCAATTCT ACTGCCATTG ACCCCTGAGT ATATCGGCTA TAGTGACGTG
CATGTGGAAG GTCAGCATTT TGCCGCTGTA CTGCCGCATA TCGATGAAGT AACGCATGAT
GGCGAGGAAG GTTTCTTTAA ATATCGTGTC GATTTTGAAG CGTTAGAAAA CTTGCCAGCG
TTAAAGGAAG GTCGTATTGG TGCGATTTGC TGCTCACGCC CGACCAATCC TACTGGCAAC
GTGCTGACGG ATGAAGAAAT GGCGCATTTG GCCGAGATTG CCAAACGCTA TGACATACCG
CTGATTATCG ATAATGCCTA CGGTATGCCC TTCCCTAATA TTATTTATTC AGACGCGCAT
CTGAATTGGG ATAACAATAC GATTCTGTGC TTTAGTCTGT CTAAAATTGG CCTACCCGGT
ATGCGTACTG GTATTATCGT TGCCGATGCT AAAGTGATCG AAGCGGTCAG CGCGATGAAT
GCCGTGGTGA ATCTAGCGCC GACACGCTTT GGCGCAGCGA TTGCCACGCC ATTGGTCGCA
AACGATCGTA TCAAGCAGTT ATCTGATAAT GAGATTAAGC CTTTTTATCA AAAGCAAGCG
ACCCTCGCTG TGAAGCTTTT GAAACAAGCA TTGGGCGATT ATCCGCTGAT GATTCATAAG
CCTGAGGGTG CGATTTTCTT ATGGCTGTGG TTTAAAGATT TACCGATTAG TACACTCGAT
CTATATGAGC GTCTCAAAGC AAAAGGCACG CTTATTGTGC CAAGCGAGTA CTTCTTCCCC
GGTGTTGACG TGAGCGACTA TCAGCACGCC CATGAATGTA TTCGTATGAG TATCGCTGCT
GATGAACAAA CGCTGATTGA CGGTATCAAG GTGATTGGAG AAGTGGTACG CGAGCTTTAC
GATAATAAGT AA
|
|---|
| Protein sequence | MKFSKFGQKF TQPTGISQLM DDLGDALKSD QPVNMLGGGN PAKIDAVNEL FLETYKALGN
DNDTGKANSS AIISMANYSN PQGDSAFIDA LVGFFNRHYD WNLTSENIAL TNGSQNAFFY
LFNLFGGAFV NEHSQDKESK SVDKSILLPL TPEYIGYSDV HVEGQHFAAV LPHIDEVTHD
GEEGFFKYRV DFEALENLPA LKEGRIGAIC CSRPTNPTGN VLTDEEMAHL AEIAKRYDIP
LIIDNAYGMP FPNIIYSDAH LNWDNNTILC FSLSKIGLPG MRTGIIVADA KVIEAVSAMN
AVVNLAPTRF GAAIATPLVA NDRIKQLSDN EIKPFYQKQA TLAVKLLKQA LGDYPLMIHK
PEGAIFLWLW FKDLPISTLD LYERLKAKGT LIVPSEYFFP GVDVSDYQHA HECIRMSIAA
DEQTLIDGIK VIGEVVRELY DNK
|
|---|
| |