| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2107 |
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| Symbol | nqrD |
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| ID | 3516094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2604756 |
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| End bp | 2605427 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670822 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_265388 |
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| Protein GI | 71066661 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.602802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA CAAAAAGTAT TTTAACCTCG CCCATTTTTG ACAATAACCC TATTGCTCTA
CAGATCTTAG GTATCTGTTC GGCATTGGCG GTAACGACCA GTGTGGCAAA TGCATTGGTG
ATGAGCGTGG CATTGACTTT GGTCACAGCG TTTTCAAGCT TTTTTATCTC TATTATCCGT
AAGCAAATCC CATCAAGCAT TCGTATTATC GTGCAGATGA CGATTATTGC TTCATTGGTT
ATTTTGGTTG ATCAGATACT AAAAGCAGTC GCTTATGATG TCAGTAAAGG CTTGTCAGTA
TTCGTTGGTT TGATTATTAC CAACTGTATC GTGATGGGAC GTGCTGAAGC GTTTGCCATG
AGCAATCCGC CTATACCCAG TTTCTTGGAT GGTATCGGTA ATGGTCTTGG TTATTCAACC
GTACTACTAT TTATCGCCAG TATCCGTGAG ATTTTGGGTG CAGGCAGCTG GTTTGGTATC
ACCATTTTAC AAACCGCGAC CGATGGTGGC TGGTATGTAC CAAATGGTCT ATTGCTACTA
CCGCCGTCAG CATTCTTTAT CATTGCCCTG TTCATCGTGA TTATCCGTAC ATGGAAACCT
GATCAGGTCG AAGACGCTGA ATTTGTAATG AAGCCGCAAT CTAAAGGCAT GGCTCAAGGG
GGCGGTCACT AA
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| Protein sequence | MADTKSILTS PIFDNNPIAL QILGICSALA VTTSVANALV MSVALTLVTA FSSFFISIIR
KQIPSSIRII VQMTIIASLV ILVDQILKAV AYDVSKGLSV FVGLIITNCI VMGRAEAFAM
SNPPIPSFLD GIGNGLGYST VLLFIASIRE ILGAGSWFGI TILQTATDGG WYVPNGLLLL
PPSAFFIIAL FIVIIRTWKP DQVEDAEFVM KPQSKGMAQG GGH
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