| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2084 |
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| Symbol | |
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| ID | 3516061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2561454 |
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| End bp | 2562737 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670789 |
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| Product | RND efflux membrane fusion protein |
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| Protein accession | YP_265365 |
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| Protein GI | 71066638 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC TGCAAGACCT TAATGATAAG CAAGTGTCTA ATCCTACACC TGAGCCTGAG
CTGCCGCCTT ATCGCAATCC TGATATGCCC AAGCATAAAC CTTCGTCAAA GCTGCCTGTG
TGGCTATTGC CTGTGCTGGT AGCAGTGCTG GTTATTGGTG TGCTGCTAGG AAAGTATTGG
GGTGGTAATG ACTCGACTAC AGATGAGTCA ACCGTTATCG CTGGGACTCA AAGTAATATG
GCGCCTACTA ATGTAGACAA TGACCAAGCT GTCTTGTCAG TTGAAACAGT GCAGCCTAGT
CAAGATAGTG TCGGCAACAC GCTAACAGCT GACGGTACGA TTAGTGCCAA AGATATTGCA
AATGTCAGTG CTAAGATCAA TGGGGTAGCG ATTGAACGGG TATTGGTTGA AGAAGGTTCG
CGTGTTAAAG CCGGTCAAGT TTTAGCGATA TTTGATACCG ATGCCATGGA GCAACAGGTC
TTGCAAGCAG AAGCAGATGT GGCCGAAGCC GAAGCTACGC TTGCTAATGC CAGCGCGGAT
GCGGCACGTG TGCTACCGCT AATTGATATA GATGCCATTA GTAAACAAGA AGCGGACCGT
TACCGTACTT CAAGAATACG CGCAGCAGCT GCCTTGCAAG CATCAAAAGC TCGCCTAAGC
AATCAGCGCT TAACCCTTGA GAATGCTAAA GTCGTTGCGC CAGTGAGTGG GGTAATCAGT
GACAAGATAG CTGAGGTCGG TATGGTCGCA GGTGGTGAGC CACTATTTAC GATTATTAAA
GGTGGTATTT TAGAGTGGCG TGCTGATATC GATCCCAAGT TAATCGGTGA TGTAAACCTT
GGTACGCCTG TTAAAGTCAG CTTGCCAAGG GATCAGTCGG TGATGGGGCA GGTGAGTCGT
ATCGCTCCGA CAGCGGATAA TAACCGGCAA ATTACTATCT ATGCGAGCTT AGATGCTAAT
TCTGCAGCGC GTGCGGGTAT GTATCAAACC GGTGAGTTTT TGCTCGGTAG CGAGCGCATG
CAAACGGTGC CCAATAGCGT CGTTGTCAGC AATGACGGCT ATGATTATGT GATGCTAGTG
ACGGATATCA AAACCCAGAA TGACAAAACG GTTGGACGTA TTCAACAGCA GCGCGTGACC
CTAGGAGATC GTATTGGGGA CAGTGTCGTA CTTGCAGAGC CTTTGCCAAA CGATATTAGA
TTGGTCAAGC AAGGCGGTAG TTTTTTAAAT GATGGTGACT TGGTACGCAT TGTGGAAAAT
AGAGCTGTGC AGGCAACACC ATGA
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| Protein sequence | MSDLQDLNDK QVSNPTPEPE LPPYRNPDMP KHKPSSKLPV WLLPVLVAVL VIGVLLGKYW
GGNDSTTDES TVIAGTQSNM APTNVDNDQA VLSVETVQPS QDSVGNTLTA DGTISAKDIA
NVSAKINGVA IERVLVEEGS RVKAGQVLAI FDTDAMEQQV LQAEADVAEA EATLANASAD
AARVLPLIDI DAISKQEADR YRTSRIRAAA ALQASKARLS NQRLTLENAK VVAPVSGVIS
DKIAEVGMVA GGEPLFTIIK GGILEWRADI DPKLIGDVNL GTPVKVSLPR DQSVMGQVSR
IAPTADNNRQ ITIYASLDAN SAARAGMYQT GEFLLGSERM QTVPNSVVVS NDGYDYVMLV
TDIKTQNDKT VGRIQQQRVT LGDRIGDSVV LAEPLPNDIR LVKQGGSFLN DGDLVRIVEN
RAVQATP
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