| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2082 |
|---|
| Symbol | |
|---|
| ID | 3516059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 2557555 |
|---|
| End bp | 2558256 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670787 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_265363 |
|---|
| Protein GI | 71066636 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1814] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00637879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCATT CTATTCACGA CGAAGCTCAT CTAAGTAATC GCAATCATTG GCTCAGGGCA
GCAGTACTTG GCGCCAATGA TGGATTGATT TCAACCGCGA GTTTATTAGT CGGTGTCGCT
GCAGCAAGTA TAAGTAGTCA GACATTGCTA TTAACAGGGA TGGCTGCGTT AACCGCAGGC
GCTCTATCGA TGGCAGCTGG TGAGTATATT TCAGTATCGT CTCAAGCAGA TACCGAAAAA
GCTGATCTGG ATAAAGAGTT GCATGAACTG ACTCATAACG CTGAGCACGA GCTCAACGAG
CTGACTAAAA TTTATGAAAC ACGTGGACTT GATCATGTCT TAGCGCATCA AGTTGCTGTC
GCTTTGACTC AGCATGATGC ACTTGAGGCA CACGCCCGAG ATGAGATTGG TTTGACAGAT
CTGAGTCAAG CTAAGCCGAT TCATGCCTCA GTTGCTTCTG GATTATCATT CATTGCTGGC
GCCATATTAC CGATTATTGG TATTTTGTTA TTGCCAGTGC AATCATTGGT CTGGTCGTTG
TCATCTTTGA CCATAGTAGG CTTAGCACTA CTTGGGATAA TATCTGCTCG CTTGGGCGGT
GCACCTGTTA TTCCTGCTAC TGCTAGAGTA GTGATTTGGG GTGTGTTAGC GATGGTCGCA
ACATCATTGA TTGGAAGATT ATTTGGGGTA GCAGCATTAT AG
|
|---|
| Protein sequence | MHHSIHDEAH LSNRNHWLRA AVLGANDGLI STASLLVGVA AASISSQTLL LTGMAALTAG
ALSMAAGEYI SVSSQADTEK ADLDKELHEL THNAEHELNE LTKIYETRGL DHVLAHQVAV
ALTQHDALEA HARDEIGLTD LSQAKPIHAS VASGLSFIAG AILPIIGILL LPVQSLVWSL
SSLTIVGLAL LGIISARLGG APVIPATARV VIWGVLAMVA TSLIGRLFGV AAL
|
|---|
| |