Gene Psyc_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2070 
SymbolnusB 
ID3516047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2544836 
End bp2545963 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content45% 
IMG OID637670775 
ProductNusB antitermination factor 
Protein accessionYP_265351 
Protein GI71066624 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC AACTCAAGCG CGCTATTAGC GCTGCACAAA CCGCACAAAT CAATGACCAA 
CAAGCTGAAG CCACGCGCAT CGCGAGCAGC AGTGCGGGTG ATCAAACCTT TGATATGAGT
GAGTCTTCTT ATAAGACCAG TCACACAGCT ATCCGCAAGG CGCGTCGCTT TGCCATGCAA
GGTCTATACG AATGGCTGGT CACTGACCGC CGTTTTGATA TCGATGGTAA ACTTGGTTGG
AAGGCCAATG CGCCGCATGA TATCGCTGCC CGTACACGCG CGACCAATGC CATGCATACC
GTACATATCG GCTACTATCA TGAAATGATG CGCGATATTC CAGAACAGAT TGACGCTCTA
AACACACTGA TTACTCAGCA GCTCGACCGT GAAATCAATA AACTTGATAC CGTCGAGCAC
GCCATTCTTT TAATTGGTGC TTACGAGCTA CAAAACCGCT TAGAGATTCC GTATAAAGTC
GTGCTTGATG AAGCCATGAA GCTGAACAAT CATTTTGGCG CGACCGATGC GCACAAACTG
ATTAATGCCG TATTGGATAG AATGGCAGTT GAGCTACGCG CTCCCGAAAT AGAAGCGGAC
AGTAAAGCCA ATCTACGCAC CTCACAAAAA GCGGCAGCTA AGCCTGCGCT CAAAACTGAT
AACAGTACAA ATAACAATGC CGACATTGAT ACGACTACCG TTGCAGAAAA ACCAACGGCA
TCAAATAAGC CTCGTATCAG TGCCAATAAC ACCAGCGTTA AACGTAATAG CGCCAGTAAA
GCCCTGGCAA ATATCAGTGA TTACAAGGCT AGTAAGCAGA ACGATGCTCA AAACATGGTT
GAGGAAAGCA TTATTAAACC TGCTAGCATC GAACCGGTTA TCGCTGATAA AGCGAATGCG
TTTGCCGCTA GTGCCGAAAA CATCGTTAAT CATCAGCCGG TAGAAGAAAA CGTCCCTGCT
AGCAATGACG TTAATGACAA TACTACATCT TTAGCAGAGG TCGAATTGCT TGACTCGAAT
AGCGTTGATG TGGATATAAA AGGCGTTGAT ATAAAAAATA TTGATGTAAA AGAAGATGCT
TCAGAAAGCG TTGAATTAAA CGATGCTGAT GCAAAAAATC AAGACTAG
 
Protein sequence
MTDQLKRAIS AAQTAQINDQ QAEATRIASS SAGDQTFDMS ESSYKTSHTA IRKARRFAMQ 
GLYEWLVTDR RFDIDGKLGW KANAPHDIAA RTRATNAMHT VHIGYYHEMM RDIPEQIDAL
NTLITQQLDR EINKLDTVEH AILLIGAYEL QNRLEIPYKV VLDEAMKLNN HFGATDAHKL
INAVLDRMAV ELRAPEIEAD SKANLRTSQK AAAKPALKTD NSTNNNADID TTTVAEKPTA
SNKPRISANN TSVKRNSASK ALANISDYKA SKQNDAQNMV EESIIKPASI EPVIADKANA
FAASAENIVN HQPVEENVPA SNDVNDNTTS LAEVELLDSN SVDVDIKGVD IKNIDVKEDA
SESVELNDAD AKNQD