Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2070 |
Symbol | nusB |
ID | 3516047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2544836 |
End bp | 2545963 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670775 |
Product | NusB antitermination factor |
Protein accession | YP_265351 |
Protein GI | 71066624 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC AACTCAAGCG CGCTATTAGC GCTGCACAAA CCGCACAAAT CAATGACCAA CAAGCTGAAG CCACGCGCAT CGCGAGCAGC AGTGCGGGTG ATCAAACCTT TGATATGAGT GAGTCTTCTT ATAAGACCAG TCACACAGCT ATCCGCAAGG CGCGTCGCTT TGCCATGCAA GGTCTATACG AATGGCTGGT CACTGACCGC CGTTTTGATA TCGATGGTAA ACTTGGTTGG AAGGCCAATG CGCCGCATGA TATCGCTGCC CGTACACGCG CGACCAATGC CATGCATACC GTACATATCG GCTACTATCA TGAAATGATG CGCGATATTC CAGAACAGAT TGACGCTCTA AACACACTGA TTACTCAGCA GCTCGACCGT GAAATCAATA AACTTGATAC CGTCGAGCAC GCCATTCTTT TAATTGGTGC TTACGAGCTA CAAAACCGCT TAGAGATTCC GTATAAAGTC GTGCTTGATG AAGCCATGAA GCTGAACAAT CATTTTGGCG CGACCGATGC GCACAAACTG ATTAATGCCG TATTGGATAG AATGGCAGTT GAGCTACGCG CTCCCGAAAT AGAAGCGGAC AGTAAAGCCA ATCTACGCAC CTCACAAAAA GCGGCAGCTA AGCCTGCGCT CAAAACTGAT AACAGTACAA ATAACAATGC CGACATTGAT ACGACTACCG TTGCAGAAAA ACCAACGGCA TCAAATAAGC CTCGTATCAG TGCCAATAAC ACCAGCGTTA AACGTAATAG CGCCAGTAAA GCCCTGGCAA ATATCAGTGA TTACAAGGCT AGTAAGCAGA ACGATGCTCA AAACATGGTT GAGGAAAGCA TTATTAAACC TGCTAGCATC GAACCGGTTA TCGCTGATAA AGCGAATGCG TTTGCCGCTA GTGCCGAAAA CATCGTTAAT CATCAGCCGG TAGAAGAAAA CGTCCCTGCT AGCAATGACG TTAATGACAA TACTACATCT TTAGCAGAGG TCGAATTGCT TGACTCGAAT AGCGTTGATG TGGATATAAA AGGCGTTGAT ATAAAAAATA TTGATGTAAA AGAAGATGCT TCAGAAAGCG TTGAATTAAA CGATGCTGAT GCAAAAAATC AAGACTAG
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Protein sequence | MTDQLKRAIS AAQTAQINDQ QAEATRIASS SAGDQTFDMS ESSYKTSHTA IRKARRFAMQ GLYEWLVTDR RFDIDGKLGW KANAPHDIAA RTRATNAMHT VHIGYYHEMM RDIPEQIDAL NTLITQQLDR EINKLDTVEH AILLIGAYEL QNRLEIPYKV VLDEAMKLNN HFGATDAHKL INAVLDRMAV ELRAPEIEAD SKANLRTSQK AAAKPALKTD NSTNNNADID TTTVAEKPTA SNKPRISANN TSVKRNSASK ALANISDYKA SKQNDAQNMV EESIIKPASI EPVIADKANA FAASAENIVN HQPVEENVPA SNDVNDNTTS LAEVELLDSN SVDVDIKGVD IKNIDVKEDA SESVELNDAD AKNQD
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