| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2040 |
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| Symbol | murD |
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| ID | 3516014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2508808 |
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| End bp | 2510238 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637670742 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_265321 |
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| Protein GI | 71066594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.389817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA GCACCGCAAC AGAAACCTTA CTTCATAAAG GCAGTGGCTT ACAAGTCGTG
GTCGGTTTGG GGCAGTCGGG ATTATCGGTC GCACATTATT TGGCTGAGCA GGGCTACCAA
GTTGCCGTCA CTGACAATCA GGAGAATCCC GCATTAGCAG ATAAACTGCC TGCTACTATT
GATATCAGAC AGTTTGGTGC GATCGATGCA GAGTTATTAC AACAAGCGGC ACGGATTATA
ATCAGTCCTG GTATCTCTCT AGATAATGAT GCGATTGCAG CGGCGCGTGC GGCAAATATT
CCAGTGGTCA GCGATATTCA GCTATTTTGT GAAGCTTGTA CGGTGCCAAT TGTTGCGATT
ACTGGCTCAA ATGCAAAAAG CACTGTGACC ACGCTGGTTG GACAAATGGC GGCAGATGCT
GGTATCAATG TTGGCGTAGG CGGTAATATT GGCGTGCCAG CGCTGAGCCT TTTGAGTAAT
GATAAAATGG AGCTAGCAGT TATAGAATTA TCTAGCTTTC AGTTAGAAAC CGTGACCAAC
TTAGGGGCGC AGGTCGCAAC AGTCCTCAAT ATGTCGCCTG ATCATTTAGA CCGTCATGGT
GATATGCTCG GCTATCACCA AGCCAAACAT CGTATCTTCC AAGGTGCCAA ATCGGTAGTG
ATTAATCGTG AAGATGCGTT GACCCGACCA TTGGTGTCAG ATAGTTTGCC GCGACTGAGC
ACTGGTATTC ATGCTCCTAA CAAGGGGCAC TATGGGCTTA TTACGGATGC AGCAGGGCAG
ACTTATTTGG CACGTGGTAC AGAGCGTCTC ATATCAGCAG ATAAACTAAA GATAAAAGGT
CGTCATAACT TACTTAATGC CCAAGCAGCA TTGGCATTGG GCGAGCTTGC TGGTTTGCCG
CTTGAGAGTA TGCTTAGCAC CTTGCAGCAG TTTGCAGGTC TTGAGCATCG CTGCCAATAT
GTCGCCACAA TTGCTGGCAT TGATTACTTT AATGATTCTA AAGGCACCAA TATTGGCTCA
ACCATGGCGG CTGTTGAAGG TTTGGGCGCG GTCTATGCAC CCAAAGACGG TAAGTTATTA
TTAATATTGG GCGGTCAAGG TAAAGCTCAG CAGTTCGGTG AACTCTCGCC TTTTATCAAT
CAATATGTGA GTCAAGTGCT CTTTATTGGC GAGGACAGTC AGCAGATTGA ACAGCATTTA
CGCGCAGCGG GTCTCAGCGA TGAGGTTAGC CTGCATCAAT GTCAGACCTT AGAAAATGCT
TTTTCGATGA TTGAGCAAGT AACGGCAAGT AGTTTGTCGC AAGTACAGGC GGTATTATTG
TCACCTGCTT GTGCAAGCTT CGATCAGTTT AATGGGTTTG TCGCGCGGGG CGAGCGCTTT
AGCCAGCTCG TTAAACAGTT GAATACCGTG TCTCAACAGG CACTATCATA A
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| Protein sequence | MTASTATETL LHKGSGLQVV VGLGQSGLSV AHYLAEQGYQ VAVTDNQENP ALADKLPATI
DIRQFGAIDA ELLQQAARII ISPGISLDND AIAAARAANI PVVSDIQLFC EACTVPIVAI
TGSNAKSTVT TLVGQMAADA GINVGVGGNI GVPALSLLSN DKMELAVIEL SSFQLETVTN
LGAQVATVLN MSPDHLDRHG DMLGYHQAKH RIFQGAKSVV INREDALTRP LVSDSLPRLS
TGIHAPNKGH YGLITDAAGQ TYLARGTERL ISADKLKIKG RHNLLNAQAA LALGELAGLP
LESMLSTLQQ FAGLEHRCQY VATIAGIDYF NDSKGTNIGS TMAAVEGLGA VYAPKDGKLL
LILGGQGKAQ QFGELSPFIN QYVSQVLFIG EDSQQIEQHL RAAGLSDEVS LHQCQTLENA
FSMIEQVTAS SLSQVQAVLL SPACASFDQF NGFVARGERF SQLVKQLNTV SQQALS
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