| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2021 |
|---|
| Symbol | |
|---|
| ID | 3515995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2488581 |
|---|
| End bp | 2490266 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670723 |
|---|
| Product | signal transduction histidine kinase sensor |
|---|
| Protein accession | YP_265302 |
|---|
| Protein GI | 71066575 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.887772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAG TCTCTTCTCT CAAACACAGT ATTTTTGTTC GTATTTATGC AGGACTATTG
ATAGTCTGCT TGTGTGTGGC ATTGTTTGCC CAGCTGTTGA TGGATACCAT CAATAAAGAG
CGGGTGCAAT CTTATCGTGA GAACATGGCG ACAGGGGCGT TTCATATCGT GAGTGAGGGT
TTGGCTCACC AAGACAACGA GGTGCAGCGT GATTATTGGT TGTCTGATGC CAGCAGCTTG
TTTGGTTCAG AATTTAAGAT TGTGTCCATT GATGAGGTGG ACTTTAATGC CAGTGAGCTG
CGCCGTTTTG AGAAAGAAAA CACGGTCGTG CGCTATGTGA GTCAACAGAC CTTTGCCGAC
GTCTATTATC GCCTACCAGA CAATCAAGGT GTTTTGACTG CGCGTATATC GCAAGTGACC
GAACAGCAAG TCAGAGCTAT TGCCGTATTT TTGCTAGATG ATTTGTCCTA TTATATTACC
TTGTCTGATA AGCGCGCACG TTTGGCGCAG TTAGAAGAAA AGTTTTCATT CCCTTTAGCG
TTTAAAGCGG TAACTGCGCT CGATTTAGAT CCTGATCAGA TGGCGCGCTT GCGCCGTGAT
GAAGTGGTCA TCTTATTACA AGATACCAAT ACCAGTAAAA GCAACTCATC TATCAAAGTT
ATTGTGCCGT CTGAAATTAG TGATATGGCG ATTTTAATTG GTCCAGTGCC TTTGTTTAAT
TGGTTTCCAC TAAACTTGAT TGTCAGTATG ATTTTGATCA GTATGTTTTT AATCAGTTTG
GGTGTGTATG CACTGATTTT CCCGCTTGAG CGCAAGTTAC AACTGATTCA AGTCGGTGTT
AATGAAGTCA GTAAAGGCAA TCTTGAAAGT CAGGTACAGG TTATCGGGCA AGATGAAATC
GCCCGTTTAG CTGCGACCTT TAATGCCATG ACGGCGCATA TTAAGCGTTT GATCGAGTCG
CAGCGAGAGT TGACTCGTGC AGTGTCGCAT GAATTGCGTA CGCCAGTTGC ACGTATTCGC
TTTGCTGTCG AGATGCTGGC AGATACTGAG GATGAGGACT CGCGTTTTAT GCAGCGTGAC
TTTATTGATG AAGATATCGA AGCGCTCAAT GGTTTGATTG ATGAGATTTT AACCTATGCG
AAACTCGAAG AAGGCTCGCC CAAACTAGAT TTAGAGCCAG TCAATCTTCG AGAGCTGCTT
GAGCAAATTG AGCGTGAAAC CAATGCCTTG GGCAAACCGA TTAAAATTGT CACCAAGCTG
CCAAATACCA AAGTAGAGGC GATCGCAGAT AGACGTTACT TACACCGAGT GATTCAGAAT
TTGGCTGGTA ATGCCTTACG CTATGCAGAG ACCACAATTA TCATCAGTGC TTGGGTAAAA
AAGGGCAATG CCTTTGTCAG TGTTGAAGAT GATGGTCACG GCATTCCAGA AGCCGATCGT
GAAAAGGTCT TTATCCCATT CTCGCGCTTG GACGACAGCC GCACACGTGC CTCAGGTGGC
TACGGATTGG GCTTGTCTAT CGTATCACGC ATTGCTTTTT GGTTTAATGG TCGTATGAAG
GTTGATGAGA GCCGTGACCT TGGTGGCGCG CGCTTCGTAA TGACATGGCC TATCAAGCCA
CTGACACAAA TCCTAGCGGC TGATGAATTG ACGCAAGAAA AGAGCGAGCG TGATTTTGAT
GCGTAA
|
|---|
| Protein sequence | MSLVSSLKHS IFVRIYAGLL IVCLCVALFA QLLMDTINKE RVQSYRENMA TGAFHIVSEG
LAHQDNEVQR DYWLSDASSL FGSEFKIVSI DEVDFNASEL RRFEKENTVV RYVSQQTFAD
VYYRLPDNQG VLTARISQVT EQQVRAIAVF LLDDLSYYIT LSDKRARLAQ LEEKFSFPLA
FKAVTALDLD PDQMARLRRD EVVILLQDTN TSKSNSSIKV IVPSEISDMA ILIGPVPLFN
WFPLNLIVSM ILISMFLISL GVYALIFPLE RKLQLIQVGV NEVSKGNLES QVQVIGQDEI
ARLAATFNAM TAHIKRLIES QRELTRAVSH ELRTPVARIR FAVEMLADTE DEDSRFMQRD
FIDEDIEALN GLIDEILTYA KLEEGSPKLD LEPVNLRELL EQIERETNAL GKPIKIVTKL
PNTKVEAIAD RRYLHRVIQN LAGNALRYAE TTIIISAWVK KGNAFVSVED DGHGIPEADR
EKVFIPFSRL DDSRTRASGG YGLGLSIVSR IAFWFNGRMK VDESRDLGGA RFVMTWPIKP
LTQILAADEL TQEKSERDFD A
|
|---|
| |