Gene Psyc_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2011 
SymbolthyA 
ID3515985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2477380 
End bp2478282 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID637670713 
Productthymidylate synthase 
Protein accessionYP_265292 
Protein GI71066565 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA GCAATTCTAT TATTAAAAAT GACCCTAGTA AAAATAAGCC GATTAAAAAC 
GAGCAAGCCT ATTTAGACCT GTTACGTCTT GTCCTAAGTG AAGGCACTGA AAAAGGTGAC
CGCACTGGAA CCGGTACGGT CAGTCATTTT GGCGCGCAGC TACGTTTTGA CCTAGCCGAT
GGTTTTCCTT TATTAACCAC CAAAAAAGTC CACTTTAAAT CCATCATCTA TGAACTATTA
TGGTTTTTAA GTGGTAGTAC CCACGTTGAT TATCTACAAC AAAACGGTGT GCGCATCTGG
AACGAATGGG CAACCGCAGA GCAGACCGCA CGCTTTAAGC GTCTTGCTGG CGACTTAGGT
CCTATTTATG GTCACCAATG GCGTAATTAT GGTGCCACTA AAGTTGAGGA CGGCAGCTAT
GATAACGATG GCTTCGATCA AATCAGTCAA GTTATCGAGC AAATAAAGAC CAATCCCAAT
TCACGACGTT TAATTGTGTC TGGTTGGAAT CCCGGTGAAG CAGAGCAAGT TGCTTTGCCA
CCTTGTCATA CGATGTTTCA GTTTTTTGTC GCGGACAACA AACTGTCGTG CCAACTTTAT
CAGCGCTCAG CGGATTTATT CCTAGGTGTG CCGTTTAATA TCGCGAGCTA CGCGCTCTTG
ACCCATATGG TAGCGCAAGT TTGCGACTTA GAAGTCGGTG AATTTATTTG GACCGGTGGC
GATTGCCATA TTTATCAAAA CCATCGCGAG CAAGTTGAAT TACAGCTAAC GCGTGAGCTT
TATACGCTGC CAACCTTGAC TCTTAACCCT GATGTGCAAG ATATTTTTGC TTTTAACTAC
GACGATATCA GCGTCAATGG CTATGAGTCA CATCCAGCGA TTAAAGCACA AGTTGCAGTA
TAG
 
Protein sequence
MTMSNSIIKN DPSKNKPIKN EQAYLDLLRL VLSEGTEKGD RTGTGTVSHF GAQLRFDLAD 
GFPLLTTKKV HFKSIIYELL WFLSGSTHVD YLQQNGVRIW NEWATAEQTA RFKRLAGDLG
PIYGHQWRNY GATKVEDGSY DNDGFDQISQ VIEQIKTNPN SRRLIVSGWN PGEAEQVALP
PCHTMFQFFV ADNKLSCQLY QRSADLFLGV PFNIASYALL THMVAQVCDL EVGEFIWTGG
DCHIYQNHRE QVELQLTREL YTLPTLTLNP DVQDIFAFNY DDISVNGYES HPAIKAQVAV