Gene Psyc_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2008 
Symboladh 
ID3515982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2473759 
End bp2474853 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content46% 
IMG OID637670710 
Productalcohol dehydrogenase protein 
Protein accessionYP_265289 
Protein GI71066562 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGA TGAAGTCACT AATATTTATT GAGCCAGGTA AAATTGAAGT TGCTGAGAAA 
AAAATCCCCG ATGTGGGTCC AAATGATGCA CTAATAAAGA TCACCACAAC CACTATTTGT
GGTACAGATA TTCATATTTT TAAGGGTGAG TATCCTGTTG CCAAAGGACT AACCATTGGT
CATGAGCCAG TCGGTATTAT CGAAAAGCTC GGTAGTGCGG TAATGGGTTA TCAAGAAGGT
CAGCGCGTCA TCGCTGGTGC AATTTGCCCA AGTTTTACCT CTTATGCCAG CCAAGATGGA
TTCCCTTCAC AAGATGGCGG TTACATTCAG CCAGATGGCA CGTGTGCTTG CCACGGCTAT
AAAGCAACTG GCGGTTGGCG CTTTGGCAAC ATCATTGATG GCACACAAGC AGAATACGTT
TTAGTGCCCG ATGCGCAGGC TAACTTAGCG CCTGTACCTG ATGGTCTGAC CGATGAGCAG
GTACTGATGT GTCCAGACAT CATGTCAACT GGCTTTAAGG GCGCAGAAAA CGCCAATATC
AAAATTGGCG ATATCGTTGC TATATTCGCG CAAGGGCCAA TCGGCTTGTG CGCGACCGCT
GGCGCAAAAC TGAGAGGCGC CTCGACCATC ATCGCCATTG ATGGTAACAA TGAGCGCTTA
GCCATGTCTA AAAAACTGGG GGCAGATATT ACCCTCAACT TTAAAGAAGT TGATGTTGTT
GACGAGATTA TGAAAATCAC TGGTGGCCGT GGTGTTGATA GCAGTATTGA AGCACTGGGC
TTACAATCCA CGTTTGAGCA AGGGATTAAG GTATTAAAGC CAGGCGGTAC CTTATCAAGC
CTCGGCGTTT ACTCCGCAGA CTTAAAAATC CCGATGGCAT ACTTTGCTTC TGGTCTTGGT
GACCACACTA TCCGCACAGC CTTGTGTCCA GGGGGTAAAG AGCGTATGCG TCGTCTCCTG
AATGTAGTAG AATCAGGTCG TGTCGATTTC TCTGAAATGG TGACTCATAC TTACGCCCTA
GACGACATTG TAGAAGCCTA TGACTTATTT ATGCATCAGC GTGATGGCGT ATTGAAAATT
GCTATTAAGC CATAA
 
Protein sequence
MSMMKSLIFI EPGKIEVAEK KIPDVGPNDA LIKITTTTIC GTDIHIFKGE YPVAKGLTIG 
HEPVGIIEKL GSAVMGYQEG QRVIAGAICP SFTSYASQDG FPSQDGGYIQ PDGTCACHGY
KATGGWRFGN IIDGTQAEYV LVPDAQANLA PVPDGLTDEQ VLMCPDIMST GFKGAENANI
KIGDIVAIFA QGPIGLCATA GAKLRGASTI IAIDGNNERL AMSKKLGADI TLNFKEVDVV
DEIMKITGGR GVDSSIEALG LQSTFEQGIK VLKPGGTLSS LGVYSADLKI PMAYFASGLG
DHTIRTALCP GGKERMRRLL NVVESGRVDF SEMVTHTYAL DDIVEAYDLF MHQRDGVLKI
AIKP