Gene Psyc_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2003 
Symbol 
ID3515977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2469003 
End bp2470502 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content47% 
IMG OID637670705 
ProductDNA helicase 
Protein accessionYP_265284 
Protein GI71066557 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CTATGCCAGC TTATATGAGC GATCCCACTG ACGAGCAGCT CAGCGCCCTC 
AATATGGCGA TGGATCACAA GTCTTTTAAA GTGGTCGCCT ATGCCGGTGC CGGTAAAACA
ACAACGCTAA AATTGATTGG TGAGCGTTTG CGTGGACGCG GCTTGTATCT AGCCTTTAAT
AAAGCCATTG CCAATGACGC CCGCGCAAAA TTTCCGTCAC ATGTAGAGTG CCGTACCTTT
CACTCACTGG CCTACCGTCA TGTTGCCCGT GATATCACCG CAAAGCTGTC GTTACCTCGA
TTTTCACCCA AGCGTTTGGG TGATGATTTG GGTTTGCAAC CAGTACAAGT ACGCAGACAG
ATGGACGGCG TTAATAAATA CATTACGCTC ACGCCAGCAC GATTATCACG CTTCGTCAGC
GATGCTATCA GCAATTTTTG TAGTACGCAT GCCAGCTATC CTGCGCCAAG GCACATACTA
TTTCCGAGCT GGCTCGATGG CTCAGATGCT GAACAGCTGC GCGAGATGCT CTACCCTGCT
GTTGAGCAGC GTTGGCTACA ATCAATTGAT GCGCGCCACC CTGCTGGTAT CGGTCATGAT
ATTTATCTAA AACTTTGGGC ATTATCTAAG CCAAGCATCC CAGCGGATTT TATTTTATTC
GATGAAGCGC AGGATGCTGA CCCGCTTATG ATGGGTATTT TGACCCAGCA GCCTCGCCAA
GTTATCTATG TGGGCGACGC TCATCAGCAG ATTTATGAAT GGCGCGGTGC GGTGAATGCA
ATGAAAAGAC TGCCATTGCC GCAAACATTA TTGACCCAGT CTTTCCGCTT TGGTGAGCCG
ATTGCTGAGA TTGCCAACAC GCTATTAAAG GCACTTCAAG AAGACGTACC GCTTAAAGGC
AATCCTAACA AGCAGTCTTC TACGGATAAA GGCATGGTGC ACAGTAAAAA AGACGCCATT
CTTTGCCGTA CGAATGCCGC GGCAATGTCA CAGCTGTTAA CTGGTCTAAA GCTTGGGCAT
AAAGTGGCAC TACAAGCCGA TACTGACCGC ATGCTTAAAT TCTGTCAAGC AGCCGAAAAT
TTAAAAAACG GTAAATCGGC GTACGGCGTA CCCGAGCTAG CATATTTTTA TAATTGGGGT
GATGTACAAG AATATTCTGA GACCAATGAA GGTAGCGACC TAAAAACACT GGTGAAGCTA
GTCGATGATC ATGGTACCAA TGTCTTAAGC CAAGCGGTCA ATAGCTTATC AAGTATCGAG
AATGCCGACT ACGTCATCTC AACGGCGCAT AAAGCCAAAG GGCTTGAGTG GGGAAAAGTG
CAGTTGGACG ATGATTTTTA TTATGATGTG ACCACCAATG CGGTAAAGAT AAGCCCAGAA
GAGTTGCGCT TGCTCTACGT TGCTTGCACA CGTGCCCAAA GTAACTTAGA CATTCATAAT
ATTAAAGACT TAATATCAGG GTTACAGACA GGGAAAAAAG TTGTTTTTGG TAATTCTTAA
 
Protein sequence
MSASMPAYMS DPTDEQLSAL NMAMDHKSFK VVAYAGAGKT TTLKLIGERL RGRGLYLAFN 
KAIANDARAK FPSHVECRTF HSLAYRHVAR DITAKLSLPR FSPKRLGDDL GLQPVQVRRQ
MDGVNKYITL TPARLSRFVS DAISNFCSTH ASYPAPRHIL FPSWLDGSDA EQLREMLYPA
VEQRWLQSID ARHPAGIGHD IYLKLWALSK PSIPADFILF DEAQDADPLM MGILTQQPRQ
VIYVGDAHQQ IYEWRGAVNA MKRLPLPQTL LTQSFRFGEP IAEIANTLLK ALQEDVPLKG
NPNKQSSTDK GMVHSKKDAI LCRTNAAAMS QLLTGLKLGH KVALQADTDR MLKFCQAAEN
LKNGKSAYGV PELAYFYNWG DVQEYSETNE GSDLKTLVKL VDDHGTNVLS QAVNSLSSIE
NADYVISTAH KAKGLEWGKV QLDDDFYYDV TTNAVKISPE ELRLLYVACT RAQSNLDIHN
IKDLISGLQT GKKVVFGNS