Gene Psyc_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1992 
Symbol 
ID3515966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2458371 
End bp2459255 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID637670694 
Productneutral zinc metallopeptidase 
Protein accessionYP_265273 
Protein GI71066546 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.377117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGC AAGGCAGACG CGGCAGTACT AACGTGCGCA CCAGTAGTGG TGGCGGTAAG 
ATAATGGGTG GCGGTATCGG TGGTATCATT ATTGCTGGTA TTTTATGGCT GGTATTTGGG
GTAAATCCCA TGACCGCATT GCAGACAGGT CAAGAGGTTG CAGGCGGTGG TAACACGTCT
ACTGAACCGG CCACTAGTGA CGATCGCGAT ACACAGTTTG TCAAAGTGGT ATTAGCGGAT
ACTGAAGAGG TTTGGCATCA GATATTCAAT GAGGGCGGTA GTACGTATAA AGAGCCGTCA
CTGATTTTAT TTAATGGGCA AGTCAGTTCT GCCTGTGGTA GTGCCAGCTC AGCGACGGGT
CCTTTTTATT GCCCAGGTGA TCAGACGGTC TATTTGGACA CGTCGTTTTT TGTAGAAATG
CGCCAAAAGC TTGGTATCTC TGGTGATATT CAAAACTCAG GGGATAGTGA AAATCAAAAC
AAAGCTGGCG ATTTTGCCCA AGCTTATGTT ATCTCCCATG AAGTAGGTCA CCATGTGCAG
ACACTGCTTG GTATTACTCA GCAAGTAAAT GAAGCTAGCC GTCAAGTGAC TCGTGCACAA
GCAAATAAAT TGTCTGTACT GCAAGAGCTA CAAGCCGATT GCTTTGCTGG TGTTTGGGCG
CAGCGCAATC AAGAGCGTGT ACAGTTTTTA GAGGCAGGTG ATATCGATGA AGCCATCAAT
GCGGCTGGTC AAATTGGTGA TGACCGCTTG GCACGTGCAG GCGGCGGGGC AGTAGTACCT
GATAACTTTA CTCATGGTAC CAGCCAACAG CGTGTAGAGT GGTTTACGCG TGGTCTAGAG
AGTGGTAATG TGCAAACTTG TGATACGTTT AGCGGTGCTT TATAA
 
Protein sequence
MKWQGRRGST NVRTSSGGGK IMGGGIGGII IAGILWLVFG VNPMTALQTG QEVAGGGNTS 
TEPATSDDRD TQFVKVVLAD TEEVWHQIFN EGGSTYKEPS LILFNGQVSS ACGSASSATG
PFYCPGDQTV YLDTSFFVEM RQKLGISGDI QNSGDSENQN KAGDFAQAYV ISHEVGHHVQ
TLLGITQQVN EASRQVTRAQ ANKLSVLQEL QADCFAGVWA QRNQERVQFL EAGDIDEAIN
AAGQIGDDRL ARAGGGAVVP DNFTHGTSQQ RVEWFTRGLE SGNVQTCDTF SGAL