| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1988 |
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| Symbol | rluA |
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| ID | 3515962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2454208 |
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| End bp | 2454921 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670690 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_265269 |
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| Protein GI | 71066542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.145306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.940926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTTCA CTGATAAAAA AATTGACGCC CTTAATGCTG AAGAAAATAC TCGTCCACCT
GAGTTTTTTC AAGTGTTTGC AAAACAGATT ACAGTCTATG AAGACGATGA TATCTGGGTG
GTTGACAAGC CCGCAGGACT ATTAAGTGTC GACGGTAAGA CACTAAAGGT CAGTTTGCTC
GCCCGCCTTG AGCGCGCCAA TCCTGCAGTC AAACTGATTC ATCGACTCGA TATGGACACC
TCTGGGCTGC TTATTTTTGC CAAAAATGCA GCGGCACAGA CCAATATTAG TAAGCAATTT
ATTGACCGAC TACCGCAAAA AAGCTATCAG GCACGGGTTT TTGGTCAATG GGAAAGCGCT
GGCGCTACTG GAAAGATATC GGTACCTGTA CGCTATGAGC CAACCACCAA GCCGCGACAT
ATCGTTGATC ATGACTGGTC AAAGCATGCG CTGACTTTAT ATGAAGTATT GGCGCATGAA
GAATGCAATG GTCAGACAGT CACGCGGGTA CTGCTAAAGC CTGTCACTGG TCGCAGCCAT
CAGCTGCGCG TGCATATGGT ACATGTCGGG CATGTGATGA TTGGTGACCC AATTTATGCA
GAAGGGCAGG CATTAGATAT TGCGCCAAGG CTGAATCTAC ATGCACAGCA ACTGCGCCTT
AAGCATCCGA CGCTTGGGGC TTGGATGGAT TGGGAAAGCC CAACACCTTT TTAG
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| Protein sequence | MPFTDKKIDA LNAEENTRPP EFFQVFAKQI TVYEDDDIWV VDKPAGLLSV DGKTLKVSLL
ARLERANPAV KLIHRLDMDT SGLLIFAKNA AAQTNISKQF IDRLPQKSYQ ARVFGQWESA
GATGKISVPV RYEPTTKPRH IVDHDWSKHA LTLYEVLAHE ECNGQTVTRV LLKPVTGRSH
QLRVHMVHVG HVMIGDPIYA EGQALDIAPR LNLHAQQLRL KHPTLGAWMD WESPTPF
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