Gene Psyc_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1968 
SymbolydfG 
ID3515942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2428060 
End bp2428812 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content45% 
IMG OID637670670 
Productglucose/ribitol dehydrogenase 
Protein accessionYP_265249 
Protein GI71066522 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000140483 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGTAT TGATTACAGG GGCAAGTGCC GGTTTTGGTA AAGCACTAGC TGAGCGTTTG 
GTTGCCAACG GTCATCGTGT GATTGGCTGT GCTAGACGCC TTGATAAGCT TAATGCCTTG
GCAGACACTT TGGGTGAGGC GTTTTTACCT GTGGTCATGG ATGTCAGTGA TACCGCTTCT
ATTCCGCAAA TCATTGCTAA TTTGCCTAAT CATTTTAAGC AAATCGATGT CTTGGTGAAT
AATGCTGGGC TTGCGCTTGG TACAGAGCCT GCGCACAATG CTAGTCTTGA TGATTGGATG
CGTATGACTG ATACCAATAT TAAAGGTTTG ATGGCGCTGA CCCACGCGGT CTTGCCAGCC
ATGGTTGCAC GAGATAGCGG TTATATCATT AATGTCGGCT CTATTGCCGG AAGCTGGCCT
TACTTTGGCG GTAACGTTTA TGGTGCAACA AAAGCCTTTG TAAAACAGTT TAGTTTAAAC
TTACGAGCTG ACTTAATTGG TACGCAAGTG CGCGTGACCA ACCTTGAACC CGGTAATGTC
GCAGGCACTG AGTTTTCAAA CGTGCGCTAT CATGGTGATG ATGACAAGGC TGCTCAAGTT
TATGATGGCT TTAAAACCAT GACGGGCGAT GATATTGGCG ATATCTTATT ATGGCTGATT
GAATCGCCTG CACATATTAA TGTCAATCGT TTAGAAGTGA TGCCAGTGGC ACAAACCTAT
AATGGTCTGA CGATTGCTAA GCAAGATTCT TAA
 
Protein sequence
MNVLITGASA GFGKALAERL VANGHRVIGC ARRLDKLNAL ADTLGEAFLP VVMDVSDTAS 
IPQIIANLPN HFKQIDVLVN NAGLALGTEP AHNASLDDWM RMTDTNIKGL MALTHAVLPA
MVARDSGYII NVGSIAGSWP YFGGNVYGAT KAFVKQFSLN LRADLIGTQV RVTNLEPGNV
AGTEFSNVRY HGDDDKAAQV YDGFKTMTGD DIGDILLWLI ESPAHINVNR LEVMPVAQTY
NGLTIAKQDS