| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1965 |
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| Symbol | |
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| ID | 3515934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2419048 |
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| End bp | 2420109 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637670662 |
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| Product | TRAP-T family transporter periplasmic substrate binding subunit |
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| Protein accession | YP_265246 |
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| Protein GI | 71066519 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.155377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00893261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAGT TAGCTCCTCT TTTTTCAATA GGTGCCTTAG CAGCTATTAG CCTTCTAGGT
TGTTCCAATC AAGCCTCTGA CAGTACTGAT GCTTCCGCAG CAACTTCTCA AGAAACAACA
ACATTACGCT TTTCTCATTT TTGGCCAGCA ACGTCATCTA TTAGCACAGA GGTCTTTGAA
CCTTGGGCCA AGCAAATAGA AGCGGACTCT AATGGTCGAC TAAAAGTAGA ACTATATCCT
TCAGCTGGTC TTGCTAAAGC AGACGTTACT TATGAATCTG CTGCCAAAGG CACGATAGAT
ATTGGATCAC AAGCACACGG CTATACTAAT GGTCGCTTTC CTTTAACTCA GATTACTGAG
CTTCCAGGCT TATCAAACTC AGCCACTCAG ATGGGTTGTA TGCTCCAAAC TCTGTATGAA
GATGGCACTT TAGCTAGTGA ATATGAAGAT TCACATTTGT TGTTTATGTA TGGCGCTGGA
CCTGGCTCAC TGCATACAAC TAACAAATTA ATTCGCACGC CTGAAGATAT GAAGGGTATG
CGTATTCGCC GTCCTTCTGC GGTCGCCGGT GACATTATTG AAAGTGCTGG TGCTTCACCA
GTAGGTTTGC CTGCCAATGA CATGTATACC TCTTTACAGC GTGGGGTCGT TGATGGTTTG
AGTTTTCCTT GGGAAGCTGT AACTGCCTTT AAAATTGATG AAATCACCAA ATACCATACC
AGTATTCCTT TTTATAGTTC GGCGCTTATG GTCACTATGA ATAAAGAGAA ATATGAAAGC
TTACCTGATG ATCTAAAAAA GGTGCTGGAT AAAAACTCAG GTATGGCGCT TGCCAATAAG
GTTGGTGAAG TATTTGATAA ACATGACCAA ATGGCGATTC AAGCTGCTAA AGATAAAGGT
GATGAAATTG TCGAGATTCC TGATCCGTTA AACGATCCAG ACTGGAAAGG ACCTCTTGAA
AAAGGAACCA ACAAATATCT TGCTGATGTC AGTGCCTTAG GGTTAGATGC AGATGGTGTT
TATGCCAAAG CTAAAGTCGC CAGTGCCGCC TGTAAAGTCT AA
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| Protein sequence | MMKLAPLFSI GALAAISLLG CSNQASDSTD ASAATSQETT TLRFSHFWPA TSSISTEVFE
PWAKQIEADS NGRLKVELYP SAGLAKADVT YESAAKGTID IGSQAHGYTN GRFPLTQITE
LPGLSNSATQ MGCMLQTLYE DGTLASEYED SHLLFMYGAG PGSLHTTNKL IRTPEDMKGM
RIRRPSAVAG DIIESAGASP VGLPANDMYT SLQRGVVDGL SFPWEAVTAF KIDEITKYHT
SIPFYSSALM VTMNKEKYES LPDDLKKVLD KNSGMALANK VGEVFDKHDQ MAIQAAKDKG
DEIVEIPDPL NDPDWKGPLE KGTNKYLADV SALGLDADGV YAKAKVASAA CKV
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