| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1960 |
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| Symbol | |
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| ID | 3515929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2413252 |
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| End bp | 2415120 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670657 |
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| Product | SSS family Na(+)/solute symporter |
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| Protein accession | YP_265241 |
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| Protein GI | 71066514 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.753241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAT TTACGATTAA TATCATTTTT GTAGGTCTGT CCTTCGCTTT ATACTTCGGT
ATTGCTTGGT GGGCACGTGC AGGTTCGACC AGTGAATTCT ATGTTGCTGG CGGCGGTGTA
CATCCTGTTG TTAACGGTAT GGCAACCGCG GCTGACTGGA TGAGTGCAGC ATCATTCATC
TCGATGGCTG GTATTATCGC CACTGGCGGT TATGCTGCAT CAACTTACTT AATGGGCTGG
ACCGGCGGTT ACGTTCTACT CGCTATGCTC CTAGCGCCTT ACCTACGTAA ATTTGGTAAG
TTCACGGTTC CTGATTTTAT TGGTGACCGC TTTTATTCTA AAACCGCTGC TATGATTGCC
GTTGTTTGTT TGATTATTGC ATCAACCACT TATGTTATCG GTCAGATGAC AGGTGCTGGT
GTGGCATTCT CACGCTTCTT AGAAGTTGAC AGTACCACTG GTCTGATTAT TGCGGCTGTT
GTTGTATTCT TCTACGCCGT ACTTGGTGGT ATGAAAGGGA TTACCTACAC GCAGGTTGCG
CAGTATGTGG TTCTTATGAT TGCCTATACG ATTCCTGCAG TGTTTATCTC ACTTGAGTTG
ACGGGTAACC CAATTCCAGG TCTTGGTTTG TTCTCAAACC ATGTTGAATC AGGCATTCCT
ATCCTAACCA AGCTTGACCA AATCGTCGTC GACTTAGGCT TTACCGCTTA TACCGCTGAT
GTGCCAAACA AGCTAAATAT GGTGCTATTT ACGTTATCAC TGATGATTGG TACCGCGGGT
CTACCTCACG TTATTATTCG CTTTTTCACG GTTCCTAAAG TTGCGGATGC CCGTTGGACA
GCTGGTTGGA CGTTGGTATT TATCGCGCTA CTATACTTCA CTGCGCCAGC AGTAGGTGCA
ATGGCGCGTC TAAATCTAAT CGATACTGTT TATCCACAAG GTGTTGACGC TCCTGCTATC
GAATATGATC AACGTCCAGA TTGGATGAAA ACATGGGAAG AAACCGGTCT TATTAAATAT
AACGACCTAA ATAACGACGG TCGCATCCAG TTATATAATG ATAATGGACT TGGCGCAGCA
GAGCTAGCAT TGGCTGCAGC AACGACTGAC GGCGGTGATG TTGCAGCAGC AACGACGACC
GTTGAAAAAG CAAAAGCTGC GCATGCTTTA GGGCGTGATG GTGTGTTTGT TGATAGAGGT
TGGGCAGGTA ACGAGCTTGA CGTCAACGCT GACATCTTAG TATTGGCTAA CCCAGAAATC
GCACAGCTAC CAGGTTGGGT TATTGGTCTT ATCGCCGCAG GTGGTTTGGC AGCAGCCCTA
TCTACAGCAG CTGGTCTACT ACTCGCAATC TCATCAGCGA TCAGTCATGA CTTGATTAAG
CGTAACCTTA ATCCTAACAT TTCTGATGCA GGCGAGCTAA AAGTCGCACG TATCACGATG
GCTATTGCGC TTGTGATTGC TACCTACTTA GGTATTAATC CACCAGGATT TGCTGCACAG
GTCGTTGCAT TGGCCTTTGG TATTGCCGGT GCCTCACTGT TCCCTGCATT GATGATGGGT
ATTTTCTCTA AACGTATTAA CAACCTTGGC GCCATCGCTG GTATGCTCAC AGGTTTGATT
AGTATCTTAG TTTATATCTT CATCTTTAAA GGCTGGTTCT TCATCACAGG TACAGCAAGC
TTCCCTGATA CTGAAGAGTA CTGGTTGTTT GGTATCTCAC CATTATCATT TGGTGTGATT
GGTGCATTGC TTAACTTTAT CGTAGCATTC GCAGTTTCTT ATGCGACTGC GCCACCACCA
GCACATATCC AAGAATTGGT TGAAAGTGTA CGTTCTCCAC GTGGTGCTGG TGCTGCAATC
GATCACTAA
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| Protein sequence | MSQFTINIIF VGLSFALYFG IAWWARAGST SEFYVAGGGV HPVVNGMATA ADWMSAASFI
SMAGIIATGG YAASTYLMGW TGGYVLLAML LAPYLRKFGK FTVPDFIGDR FYSKTAAMIA
VVCLIIASTT YVIGQMTGAG VAFSRFLEVD STTGLIIAAV VVFFYAVLGG MKGITYTQVA
QYVVLMIAYT IPAVFISLEL TGNPIPGLGL FSNHVESGIP ILTKLDQIVV DLGFTAYTAD
VPNKLNMVLF TLSLMIGTAG LPHVIIRFFT VPKVADARWT AGWTLVFIAL LYFTAPAVGA
MARLNLIDTV YPQGVDAPAI EYDQRPDWMK TWEETGLIKY NDLNNDGRIQ LYNDNGLGAA
ELALAAATTD GGDVAAATTT VEKAKAAHAL GRDGVFVDRG WAGNELDVNA DILVLANPEI
AQLPGWVIGL IAAGGLAAAL STAAGLLLAI SSAISHDLIK RNLNPNISDA GELKVARITM
AIALVIATYL GINPPGFAAQ VVALAFGIAG ASLFPALMMG IFSKRINNLG AIAGMLTGLI
SILVYIFIFK GWFFITGTAS FPDTEEYWLF GISPLSFGVI GALLNFIVAF AVSYATAPPP
AHIQELVESV RSPRGAGAAI DH
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