Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1952 |
Symbol | |
ID | 3515921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2404530 |
End bp | 2406005 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670650 |
Product | transglycolase |
Protein accession | YP_265234 |
Protein GI | 71066507 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.135275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTGT CTCATTTGTC CACCTTGTCT TTATTGACTG CAGCTATTGG TTTAAGCCTT GCCAGCACCG CCCAAGCTGC CAAATCAGAC GCACCAAACT TGTCTAATAC TCAATTTCAA CAGTGCTTGG ATGATCTAAA AAACTCTAGC AAATTTCGTG GTGTCGATAG CTATACTTTT AATAACTATC GCCCATCTCA GCCTGATCCA AGTGTGATTC AATCGCTCAA CTATCAGCCT GAATTTCAGA AAGATGTCTG GGATTATTTA TCTTCGCTCG TTGACACCGA ACGAGTAGCA GATGGTATCC AAGCCAAACG TCAATGGGCA GATACTTTGC GTAAAATTGA ATCGCGTTAT GGCGTCAAAG CCGAGCACGT ATTAGGCGTT TGGGGCGTGG AGTCTAACTT TGGGCAGACA TTGGGCAAAA AACCTTTATT TGAATCTTTA GCGACCTTGT CTTGCTTTGA TCGTCGTCAA AGCTATTTTC AAGGCGAATA TGCCAATGCC TTAAAAATCG TACAAAACGG TGATATTGCG CCAAGCGATA TGACGGGCTC ATGGGCAGGC GCTTTTGGGC AAACGCAATT TATGCCAAGC ACATTTCTAG AATTGGCGGT TGATTTCGAT GGTGATGGTC GTCGCGACTT GGTCAATAGT GTTCCTGATG CACTCGCCTC TACCGCTAAC TTTTTAGATA AGCGCGGCTA TCGTTCAGGC GAAGCATGGG GTTATGAAGT TAAACTGCCA AGTGGGTTTT GGGCAGCTTC TAATCGTAAA GATAAAAAAT CGATGAGTCA CTGGCGTAAT CAAGGCTTAA CCCTTGCTAA TGGTAGCCCG TTGCCTTCCG ACTTGAGTAG TGCTGGATTA TTATTACCTG CTGGTAAAGA CGGTCCTGCA TTTTTAGTTG GTAAAAATTT CGATACTTTT TATTCCTACA ATGCATCAGA AAGCTATGCA CTGGCGATTG CTCATTTATC GGATTTGATT ACTCGCGAAG ATAGCAGTAA AACTGACTTT ATCACAGCTT GGCCAACTGA TGACCCTGGT ATTGGTCGCC AAGAATCCAG AGCGATTCAG CAAGCATTAT TGAACGCAGG CTATGACATT GGCGCAGTCG ATGGCATTAT CGGTGATAAT ACTCGTACTG CCATTCAGCA ATACCAGTCT AGTCGTGGTA TTTTTCCGGC TGATGGACGC GCAGGGCAGA AATTTTATCG TGCCATCGTG GGTAATGCGG CGCCTAACAA TTCACAATAT GGTAATTCAT ATGGACAGCC AACAAACAGT CGTCCTTTAA AACCAGCGTC TGCTGATCGT ATGGGACAAT TGATTCAACA GCAAAATACC ACGCCTAATA GCTACTCGCA GCCTACAGCG ATTACTCCAT CAAACTCAGG CACAACGCGA TATCGTCGCG TCACAGGCGC CGATGGTGTC ATCACACTGG TACGTATTGA TGAAGGCTTA TTATAG
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Protein sequence | MRLSHLSTLS LLTAAIGLSL ASTAQAAKSD APNLSNTQFQ QCLDDLKNSS KFRGVDSYTF NNYRPSQPDP SVIQSLNYQP EFQKDVWDYL SSLVDTERVA DGIQAKRQWA DTLRKIESRY GVKAEHVLGV WGVESNFGQT LGKKPLFESL ATLSCFDRRQ SYFQGEYANA LKIVQNGDIA PSDMTGSWAG AFGQTQFMPS TFLELAVDFD GDGRRDLVNS VPDALASTAN FLDKRGYRSG EAWGYEVKLP SGFWAASNRK DKKSMSHWRN QGLTLANGSP LPSDLSSAGL LLPAGKDGPA FLVGKNFDTF YSYNASESYA LAIAHLSDLI TREDSSKTDF ITAWPTDDPG IGRQESRAIQ QALLNAGYDI GAVDGIIGDN TRTAIQQYQS SRGIFPADGR AGQKFYRAIV GNAAPNNSQY GNSYGQPTNS RPLKPASADR MGQLIQQQNT TPNSYSQPTA ITPSNSGTTR YRRVTGADGV ITLVRIDEGL L
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