Gene Psyc_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1948 
Symbol 
ID3515918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2401172 
End bp2402224 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content46% 
IMG OID637670646 
Producthypothetical protein 
Protein accessionYP_265230 
Protein GI71066503 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR00452] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA ACACTATTCT CCACGCAGAA CGCGAACTGT ATTTAACCTT GCTAGCATGG 
GCACAGCAGC AGCCGAACGC TTATGAGTGG CTCACGCAAC TGCCTACATG GTTAAACGAT
ATAAAAGATA AAGCCAATTA CGCTCATGCG CCAGCTTATC AAGCTTCGGT TGCGCGCTTG
CCCACATTGA CCGTCGATAA TGTTCAGTTA AATAGCGATA TATTGACGAT CGATGCACAA
TTAAGTGATT CTGAGCGTAA ACAAGCAACT GCCTTGTTAA AGCAGCTGAT GCCGTGGCGC
AAAGGACCTT TTAAAATTGG CAGTAGCCAA AATGAAGGGG AGCAAGCCGA GCCAATTTTT
ATCGATACAG AATGGCACAG TGATTGGAAG TGGCAACGAG TCGCACCGCA TTTGGGTAAT
TTAAAAGGGC GTCGTGTATT AGATGTGGGC GGTGGCTCTG GCTATCATGG CTGGCGTATG
GCAGGGGCAG GTGCTGATAC GGTTATTATT ATTGACCCAT CGTGCTTGTT TTATCATCAG
TTTATGGCAA TTCGTCATTT TGTCGGTAGC GCCGATGCTC ATGACATAGG TCGTTATCGT
ACCCACTATA TTCCAGTGCC GCTTGAAGCA TTACCGGATA ATAGCCAGCT GTTTGATACC
GTATTTAGTA TGGGAGTGCT CTATCATCGT CAGTCGCCCT TTGAGCATTT ACAGCAGCTA
AAAGGTCAAC TGGTAAAAGG TGGTGAGCTG GTACTTGAAA CTTTGGTGAT AGAAGGCGAT
GCCAATACCG TACTGGTACC GCATGACCGT TATGCTCAAA TGAATAACGT GTATTTTCTA
CCGTCGGTGG CAGCATTAAT TGGCTGGCTT GAAAAAGCAG GATTTACAGA AGTGCGCTGT
GTCGATGTGG CAGTGACCTC AACCGATGAG CAGCGCAAAA CTGAGTGGAT GAATTATCAT
TCGTTAGCAG ATTTCTTAGA TCCTAATGAT CCAACAAAGA CTATTGAAGG CTATCCTGCG
CCGATGCGTG CCACTCTGAT TGCCAAAAAA TGA
 
Protein sequence
MLNNTILHAE RELYLTLLAW AQQQPNAYEW LTQLPTWLND IKDKANYAHA PAYQASVARL 
PTLTVDNVQL NSDILTIDAQ LSDSERKQAT ALLKQLMPWR KGPFKIGSSQ NEGEQAEPIF
IDTEWHSDWK WQRVAPHLGN LKGRRVLDVG GGSGYHGWRM AGAGADTVII IDPSCLFYHQ
FMAIRHFVGS ADAHDIGRYR THYIPVPLEA LPDNSQLFDT VFSMGVLYHR QSPFEHLQQL
KGQLVKGGEL VLETLVIEGD ANTVLVPHDR YAQMNNVYFL PSVAALIGWL EKAGFTEVRC
VDVAVTSTDE QRKTEWMNYH SLADFLDPND PTKTIEGYPA PMRATLIAKK