Gene Psyc_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1944 
SymbolpfoR 
ID3515914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2396574 
End bp2397668 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID637670642 
Producttoxin regulator pfoR 
Protein accessionYP_265226 
Protein GI71066499 
COG category[R] General function prediction only 
COG ID[COG3641] Predicted membrane protein, putative toxin regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.737194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAT CTAATTCAGC AGTAACCACG CCAAGTCCCT TTAAAGTGTT TTTTCAAAAA 
TACTTTATTG ATGCTTTTAC TGGTATGGCA TTGGGGCTTT TTGTCACCTT AATAGCGGGT
CTCATCATCT CGCAAATTGG GGGCTGGCTA AATCTGCCGG CACTGATTGC CGTCGGAAAA
TTGGCATCCG TGCTAATGGG CGCGGGTATC GGCGTCGGCA TTGCTTATTA TCTAAAAGCG
CCAACTTTGG TGATGCTTAG CTGCTTGGTT GCTGGTATGT TGGGCGCTCA CTCTGAAGCT
TTGATGGCAG GCAATCTATT TATTGCGCAA GAAGCAGGTC CTGCCACCTT TGCCGCGCTA
CCGGGTAATC CTATTGGTGC GTATTTGGCG TCAGTTTTTG CCTATCGTGC TGGTACATGG
GTCGCAGGCA AGACCAAGCT TGATATTTTA CTGGTGCCTT TATTGGTATG CGCCGTGGCA
TTAGCCGTAT GTGCACTACT AAACCCTCCT GTCGTTGCCG TGGTCAATGC CATTGGTCAA
GGCATTCAAG CAGCAACTAC TTTACAGCCA TTATTAATGG GTATCGTCAT TGCTGTAGTA
GTCGGTATAT TACTGACGAT GCCGACCTCT AGTGCTGCTA TTTGTATTGC AATTGGACTT
GGTGGTGTAG CAGGTGGGGC TGCAGTAGTC GGCTGTGCGG CACATATGAT TGGCTTTGCC
GTCGCCAGTT TTAAAGACAA TGGCATCAGT GGGGTTGTGT CTCAGGGTCT GGGCACCAGT
ATGCTGCAAA TCCCTAATGT ACTCAGAAAA CCCATCATTT TATTACCTGC TGTCATCGCA
AGCGCCATCG TCGGTCCGAT AGCGACCGTC GGCTTTGAGC TAGCATGTAC GGCTACAGGA
GCAGGTATGG GAACTGCAGG ACTGGTTGGT GTGTTTGGCG TGATTGAAGC GTCACAAGAG
ATTATGAGTA CCAGTCAATT ATGGACCGCG ATTATTTTAT TAATGTTTGT ATTACCGGCT
GTGATTGCTG GCGTTGTGGC TTATATGATG CGTCGATTTG GTTGGTTGGT GGATGGGGAT
ATGAAACTGC CTTAA
 
Protein sequence
MTVSNSAVTT PSPFKVFFQK YFIDAFTGMA LGLFVTLIAG LIISQIGGWL NLPALIAVGK 
LASVLMGAGI GVGIAYYLKA PTLVMLSCLV AGMLGAHSEA LMAGNLFIAQ EAGPATFAAL
PGNPIGAYLA SVFAYRAGTW VAGKTKLDIL LVPLLVCAVA LAVCALLNPP VVAVVNAIGQ
GIQAATTLQP LLMGIVIAVV VGILLTMPTS SAAICIAIGL GGVAGGAAVV GCAAHMIGFA
VASFKDNGIS GVVSQGLGTS MLQIPNVLRK PIILLPAVIA SAIVGPIATV GFELACTATG
AGMGTAGLVG VFGVIEASQE IMSTSQLWTA IILLMFVLPA VIAGVVAYMM RRFGWLVDGD
MKLP