Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1944 |
Symbol | pfoR |
ID | 3515914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2396574 |
End bp | 2397668 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637670642 |
Product | toxin regulator pfoR |
Protein accession | YP_265226 |
Protein GI | 71066499 |
COG category | [R] General function prediction only |
COG ID | [COG3641] Predicted membrane protein, putative toxin regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.737194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTAT CTAATTCAGC AGTAACCACG CCAAGTCCCT TTAAAGTGTT TTTTCAAAAA TACTTTATTG ATGCTTTTAC TGGTATGGCA TTGGGGCTTT TTGTCACCTT AATAGCGGGT CTCATCATCT CGCAAATTGG GGGCTGGCTA AATCTGCCGG CACTGATTGC CGTCGGAAAA TTGGCATCCG TGCTAATGGG CGCGGGTATC GGCGTCGGCA TTGCTTATTA TCTAAAAGCG CCAACTTTGG TGATGCTTAG CTGCTTGGTT GCTGGTATGT TGGGCGCTCA CTCTGAAGCT TTGATGGCAG GCAATCTATT TATTGCGCAA GAAGCAGGTC CTGCCACCTT TGCCGCGCTA CCGGGTAATC CTATTGGTGC GTATTTGGCG TCAGTTTTTG CCTATCGTGC TGGTACATGG GTCGCAGGCA AGACCAAGCT TGATATTTTA CTGGTGCCTT TATTGGTATG CGCCGTGGCA TTAGCCGTAT GTGCACTACT AAACCCTCCT GTCGTTGCCG TGGTCAATGC CATTGGTCAA GGCATTCAAG CAGCAACTAC TTTACAGCCA TTATTAATGG GTATCGTCAT TGCTGTAGTA GTCGGTATAT TACTGACGAT GCCGACCTCT AGTGCTGCTA TTTGTATTGC AATTGGACTT GGTGGTGTAG CAGGTGGGGC TGCAGTAGTC GGCTGTGCGG CACATATGAT TGGCTTTGCC GTCGCCAGTT TTAAAGACAA TGGCATCAGT GGGGTTGTGT CTCAGGGTCT GGGCACCAGT ATGCTGCAAA TCCCTAATGT ACTCAGAAAA CCCATCATTT TATTACCTGC TGTCATCGCA AGCGCCATCG TCGGTCCGAT AGCGACCGTC GGCTTTGAGC TAGCATGTAC GGCTACAGGA GCAGGTATGG GAACTGCAGG ACTGGTTGGT GTGTTTGGCG TGATTGAAGC GTCACAAGAG ATTATGAGTA CCAGTCAATT ATGGACCGCG ATTATTTTAT TAATGTTTGT ATTACCGGCT GTGATTGCTG GCGTTGTGGC TTATATGATG CGTCGATTTG GTTGGTTGGT GGATGGGGAT ATGAAACTGC CTTAA
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Protein sequence | MTVSNSAVTT PSPFKVFFQK YFIDAFTGMA LGLFVTLIAG LIISQIGGWL NLPALIAVGK LASVLMGAGI GVGIAYYLKA PTLVMLSCLV AGMLGAHSEA LMAGNLFIAQ EAGPATFAAL PGNPIGAYLA SVFAYRAGTW VAGKTKLDIL LVPLLVCAVA LAVCALLNPP VVAVVNAIGQ GIQAATTLQP LLMGIVIAVV VGILLTMPTS SAAICIAIGL GGVAGGAAVV GCAAHMIGFA VASFKDNGIS GVVSQGLGTS MLQIPNVLRK PIILLPAVIA SAIVGPIATV GFELACTATG AGMGTAGLVG VFGVIEASQE IMSTSQLWTA IILLMFVLPA VIAGVVAYMM RRFGWLVDGD MKLP
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