Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1940 |
Symbol | tig |
ID | 3515910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2390857 |
End bp | 2392200 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670638 |
Product | trigger factor |
Protein accession | YP_265222 |
Protein GI | 71066495 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG ATTTACAAGT CACAACCAAC AAGTTATCTA ACAAAGAAAC GCAACTAACG GTTAAAGTAC CCGTTGAAAA GATTCAAAAC AAAGTGGAAG GCCGTATTCG CCAAGTAGCG AAAACTGCCA AAATTGACGG TTTCCGTAAA GGTAACGTCC CTATGTCGCA TATCCGCTCT CAATACGGTG CTGGCATTCA ACAAGAAGTG ATCAACGATG TCATCCGTGA TACCGTTTTT GAAGCGATCA AATCTGAAGA CATCCGCGCC GTTGGCATGC CAAACATCGA CGACGTAAAA CTTGAAGATG ATTTCTTGGT TTATCAAGCG ACCGTTGAAA TTTTCCCAGA AATTGATATT CAAGGTATCG ATGAAATCGA AGTTGAGCGT CACACAGCGA CGGTTAACGA AGAAGACGTT GACACCATGA TCGAAAACCT ACAAAAACAA CGTGAAGAAT TCGTTGAGAA AAAAGGTAAA GCAGACAAAG GCAATCAAGT CACTTTTGAC TTTGAAGGCT CTATCGATGG CGAAAAATTC GAAGGCGGTT CTGCTGAAGA CTTCAAACTG GTTATCGGTA GCAACCAGAT GATTCCTGGT TTTGAAGCAG GCATCAAAGG CATGAAAGCT GGCGAAGAAA AAACCATCGA CGTGACTTTC CCAGAAGATT ATCAAGCTGA AAACTTGGCT GGTAAAGAAG CTCAGTTCAA AATCAATGTA AAATTGGTTG AAAAATCTAA GCTACCTGAA ATGGATGATG CGTTCCTTGA GCTGTTCGGT GTTAAAGAAG GCGGCGTTGA GAAGTTAAAA GATGACGTTC GCAAAAACAT GGAACGCGAA ATCAAAAATG CTGCGCGTAG CCAAGTGAAA CAAGCGACTT TTGATGCGTT GCTAGAAAAG AACGAGTTTG ACGTACCAAA CGCCATGCTA GAGCAAGAAA TCGAGCGTCA ACGCAACATG ATGATGCAAC GTTTTTCTCA ACAGTTCGGT GCTAATGCTG ATAGCTTCGA TAAAGACATG TTACCAAATG AGCTATTCGA AGAGCAAGCG CTACGTGCTG CCCGTCTTGG CATCATCGTT GCTCGCGTTA TCGATACCAA AGGCTTAGAA GTTGACCAAG CTCGCGTTGA GACTTTCATC AAAGAAGCGG CTGAAAACTA CGAAGATCCA GCAGAAGTGA TTGAGTACTA CACAACTGAT AAGCAACAGC GCGCTAACAT TGAGTCTGTG GTACTAGAAG ACCAAGTAGT CGATTATTTG ATTGGTCAGG GCAAAGTAAC TGACAAAGAA GTGAGCTACC AAGACCTATT AGCTGCTCAG CAACAACAGC AGCAAGCGAT GTAA
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Protein sequence | MATDLQVTTN KLSNKETQLT VKVPVEKIQN KVEGRIRQVA KTAKIDGFRK GNVPMSHIRS QYGAGIQQEV INDVIRDTVF EAIKSEDIRA VGMPNIDDVK LEDDFLVYQA TVEIFPEIDI QGIDEIEVER HTATVNEEDV DTMIENLQKQ REEFVEKKGK ADKGNQVTFD FEGSIDGEKF EGGSAEDFKL VIGSNQMIPG FEAGIKGMKA GEEKTIDVTF PEDYQAENLA GKEAQFKINV KLVEKSKLPE MDDAFLELFG VKEGGVEKLK DDVRKNMERE IKNAARSQVK QATFDALLEK NEFDVPNAML EQEIERQRNM MMQRFSQQFG ANADSFDKDM LPNELFEEQA LRAARLGIIV ARVIDTKGLE VDQARVETFI KEAAENYEDP AEVIEYYTTD KQQRANIESV VLEDQVVDYL IGQGKVTDKE VSYQDLLAAQ QQQQQAM
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