Gene Psyc_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1932 
Symbol 
ID3515902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2380283 
End bp2380858 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content41% 
IMG OID637670630 
Producthypothetical protein 
Protein accessionYP_265214 
Protein GI71066487 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00511783 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA TGATTACTGA TCGTACTTAC CGTATTGACC GTGAAAACAC CCAAGCGATG 
ATAATTGACG TTCAAGAACG TCTGACCCCG CATATCTATG ACCACGAAAA TATTCTCAAA
AAAATAACCA CTTTGATTAA AGGTCTGCAA GCACTTGATG TTCCCATTAT GCTTAATGAG
CAATATAAAA AAGGCTTGGG CGAAACCTTA CCTGAAATTT ATGAATTATT AGAAGGCGAT
AATGCCAAGG GCTTTGAAAA AGTCACGTTT AGTGCCTGCG ACAATGACGA TTCATGGAAT
CATCTTGCCC AGCAAAATCG AAGCATTGTT TTATTATTTG GTGTAGAGAC ACATGTCTGC
GTACTACAAA CCGCGCTTGA TTTGCTGGAT AACGGTATGC AGCCGGTCAT TATTGGTGAT
GCGGTAGGCT CACGTTTTCC GTATGATAAA AAGCAAGCGA TTCGCCGTAT TCGCCGTGCT
GGTGGTGTGA TTACTACGGT CGAAACCATT CTGTTTGAGC TATGTCGTAG TAGTAAAGAC
CCTGCTTTTA AAACCATCAG TAATTTGATT AAATAG
 
Protein sequence
MSTMITDRTY RIDRENTQAM IIDVQERLTP HIYDHENILK KITTLIKGLQ ALDVPIMLNE 
QYKKGLGETL PEIYELLEGD NAKGFEKVTF SACDNDDSWN HLAQQNRSIV LLFGVETHVC
VLQTALDLLD NGMQPVIIGD AVGSRFPYDK KQAIRRIRRA GGVITTVETI LFELCRSSKD
PAFKTISNLI K