Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1912 |
Symbol | |
ID | 3515882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2360398 |
End bp | 2360745 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670610 |
Product | carboxymuconolactone decarboxylase family protein |
Protein accession | YP_265194 |
Protein GI | 71066467 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.116994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00092769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAAAT CATTTGACGA TATCACCAAG CACGTTTCAA CCAATATGGC TAAACTACAT AAGCACATTC CCGAAACCAC CAAAGCGTTT TCTCAACTTG GTGCAGCGGC AACGGCTGAT GGTGTGTTAG ATAAAAAAAC CAAAGAGCTG ATTGCGCTAG CATTAGCGGT TGGCGCTCGC TGTGATGCTT GCATTGGTTT CCATACCAAA ACATTAGTAA AGCTTGGCGC GACTGAACAG GAAGTGGCTG AAACATTGGG CTTGTGTGTT TATATGGGCG GTGGGCCATC TATGATGTAC GCGGCTGAAG CGATAGCAGC ATTCAATGAG TTTAGTAAAG AAAGCTAG
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Protein sequence | MSKSFDDITK HVSTNMAKLH KHIPETTKAF SQLGAAATAD GVLDKKTKEL IALALAVGAR CDACIGFHTK TLVKLGATEQ EVAETLGLCV YMGGGPSMMY AAEAIAAFNE FSKES
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