Gene Psyc_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1912 
Symbol 
ID3515882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2360398 
End bp2360745 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content45% 
IMG OID637670610 
Productcarboxymuconolactone decarboxylase family protein 
Protein accessionYP_265194 
Protein GI71066467 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.116994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00092769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAAAT CATTTGACGA TATCACCAAG CACGTTTCAA CCAATATGGC TAAACTACAT 
AAGCACATTC CCGAAACCAC CAAAGCGTTT TCTCAACTTG GTGCAGCGGC AACGGCTGAT
GGTGTGTTAG ATAAAAAAAC CAAAGAGCTG ATTGCGCTAG CATTAGCGGT TGGCGCTCGC
TGTGATGCTT GCATTGGTTT CCATACCAAA ACATTAGTAA AGCTTGGCGC GACTGAACAG
GAAGTGGCTG AAACATTGGG CTTGTGTGTT TATATGGGCG GTGGGCCATC TATGATGTAC
GCGGCTGAAG CGATAGCAGC ATTCAATGAG TTTAGTAAAG AAAGCTAG
 
Protein sequence
MSKSFDDITK HVSTNMAKLH KHIPETTKAF SQLGAAATAD GVLDKKTKEL IALALAVGAR 
CDACIGFHTK TLVKLGATEQ EVAETLGLCV YMGGGPSMMY AAEAIAAFNE FSKES