Gene Psyc_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1902 
SymbolhisD 
ID3515872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2350045 
End bp2351340 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID637670600 
Producthistidinol dehydrogenase 
Protein accessionYP_265184 
Protein GI71066457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000519467 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0351537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAT TAAGTACGCA AGACGCCGAT TTTGACAGTC AGTTGACAGA GCTGCTTGCT 
TTTGAAACCG TTAATGATGC AACGTTACTC ACAACGGTAG ATGACATCAT TGCTAGAGTG
CGTCATGGTG GCGATAGTGT TGTACTAGAA TTGACGCAAC AGTTTGATCA ACATCCAGCA
ACGACGACGC AAGCATTGGA ATTATCCAAA GAGGCGCTTG CTGAAGCATT CGCCAATCTT
GATGATGTTG TGAAAAGCGC CCTAATCACA GCGGCAACTC GGGTAAAGAC TTTTCATGAG
CGCCAAGTGC AAGAGACATG GCAATATGAA GATGAGCTCG GTAATCGCTT AGGTCAAAAG
GTCACAGCGC TTGATCGCGT TGGGATTTAT GTGCCGGGCG GTTTAGCATC TTATCCTTCT
TCAGTATTAA TGAACGCCAT TCCTGCCAAA GTTGCTGGCG TCAAAGAGGT CATCATGGTT
GTGCCCGCCC CAAAAGGTGT ACTCAATCCT TTGGTACTGG CAGCTGCTCA TTTAGCAAAA
GTTGATCGCG TCTTTACCAT TGGCGGTGCC CAAGCGGTTG CCGCATTGGC ATATGGCACT
GAGACGATTC CGGCAGTAGA TAAAATCACT GGACCGGGTA ATAAATATGT TGCAGCAGCC
AAGCGCGCAG TATTTGGTCA AGTCGGTATC GATATGATTG CCGGACCATC TGAAGTGCTA
GTATATGCAG AAGGCGAGGC ACAAGACCGT GCTGATTGGC TGGCGATGGA TTTATTGTCA
CAGGCAGAGC ATGATCGCAT TGCTCAAGCT ATTTTTGTGA CCACAAGTGC ACAGCAGCTT
AAAGAGGTCG CCATTGAAAT TGAAAAAGCA TTGGCTGAAT TGCCTAAGGC GGATATTGCT
CGTGATTCGC TAAAAAATCG TGGCGTGCTT ATCTTAGTAA GAGACCGCGA AGAGGGCATG
GCAGTGATCA ATCGTGTTGC GCCTGAGCAT TTGGAGTTGT CTGTTGATCA CCCTGATGCG
CTGCTTAATA GTATTCGTCA CGCAGGCGCT ATCTTTATGG GTCGTCATAC GCCAGAGGCA
ATCGGTGATT ATTGTGCAGG ACCCAACCAT GTGCTACCAA CATCGGGCAC CGCACGTTTT
TCATCACCAC TTGGGGTTTA TGACTTCCAG AAGAAATCCT CTATTATTTA TTGTTCTGAG
TCTGGCAGTA AGCCTCTGGC GCAGACGGCT GATATTTTAG CGCAACATGA GGACTTAGAA
GCCCATGCAC GTTCAGCCCG TTATCGCTAT CAGTAA
 
Protein sequence
MRQLSTQDAD FDSQLTELLA FETVNDATLL TTVDDIIARV RHGGDSVVLE LTQQFDQHPA 
TTTQALELSK EALAEAFANL DDVVKSALIT AATRVKTFHE RQVQETWQYE DELGNRLGQK
VTALDRVGIY VPGGLASYPS SVLMNAIPAK VAGVKEVIMV VPAPKGVLNP LVLAAAHLAK
VDRVFTIGGA QAVAALAYGT ETIPAVDKIT GPGNKYVAAA KRAVFGQVGI DMIAGPSEVL
VYAEGEAQDR ADWLAMDLLS QAEHDRIAQA IFVTTSAQQL KEVAIEIEKA LAELPKADIA
RDSLKNRGVL ILVRDREEGM AVINRVAPEH LELSVDHPDA LLNSIRHAGA IFMGRHTPEA
IGDYCAGPNH VLPTSGTARF SSPLGVYDFQ KKSSIIYCSE SGSKPLAQTA DILAQHEDLE
AHARSARYRY Q