| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1890 |
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| Symbol | rplA |
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| ID | 3515859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2335584 |
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| End bp | 2336285 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637670587 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_265172 |
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| Protein GI | 71066445 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.487201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAGC TAACCAAACG TCAAAAAGAA ATCAATAGCC GTATTGAGCA CGAAAAACAA
TACACGATCG AAGAAGCGGT TCAAATCTTA AACGATTTAC CACCTCTTAA ATTCAAAGAG
TCTATTGATA TCGCAGTAAA CTTGGGCGTT GACCCACGTA AATCTGATCA AGTCGTACGT
GGCGCAACCA ACTTACCTGC GGGTACTGGT AAAACCAAAC GCGTTGCTGT ATTCGCTCAA
GGCGCTGCTG CTGAAGCCGC TAAAGAAGCT GGTGCTGACA TCGTTGGTTT TGAAGACCTA
GCAGAATCAA TCAAAGCCGG TAACATGGAC TTTGATGTCG TTATTGCTGC TCCTGATGCA
ATGCGTGTTG TTGGTCAACT AGGTACTATC CTAGGCCCAC GTGGTCTAAT GCCTAACCCT
AAAGTCGGTA CGGTTACGCC TAACGTTGCT GAAGCGGTTC TTAACGCTAA AGCCGGTCAA
GCACAGTATC GTGTAGACAA AGCAGGTATT ATCCACACGA CTATCGGTCA AGTTGGTTTT
ACTGCTGAGC AAGTAATCCA GAATGCTGAA GCACTGATTT CAGATTTGAG ACGTGCTAAG
CCTGCTACTT CTAAAGGTAC TTTCATCAAG AAAATTACCT TGTCTAGCAC CATGGGTCCT
GGTCTAAGTA TTGATCCAGT TCCATATCGC ACAGCGAAAT AA
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| Protein sequence | MSKLTKRQKE INSRIEHEKQ YTIEEAVQIL NDLPPLKFKE SIDIAVNLGV DPRKSDQVVR
GATNLPAGTG KTKRVAVFAQ GAAAEAAKEA GADIVGFEDL AESIKAGNMD FDVVIAAPDA
MRVVGQLGTI LGPRGLMPNP KVGTVTPNVA EAVLNAKAGQ AQYRVDKAGI IHTTIGQVGF
TAEQVIQNAE ALISDLRRAK PATSKGTFIK KITLSSTMGP GLSIDPVPYR TAK
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