| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1883 |
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| Symbol | pilM |
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| ID | 3515852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2319745 |
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| End bp | 2320800 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670580 |
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| Product | type IV pilus assembly protein |
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| Protein accession | YP_265165 |
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| Protein GI | 71066438 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.685272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCTAT TTACTTCTAA GAGTCGATAT TTGATTGGCG TGGATATTGG TACCACCTCA
GTCAAGCTGG TTGACATACA GCGCCAACAA GGCGTTTTCC ACCTAAGATC TTATGGTACT
GAAATATTAT CTGAAGGCAT AGTCATTGAT AAACTCATTG TAGACACTGA AGCGGTAGGT
AATACTATAG CAGGCTTGGC TCGACGTTGC CAAGCGGTGG GCAGTAGTGC TGCCACTGCA
GTCTCAGGGT CCGCGGTGAT TACCAAAATC ATCGATATGG ATATGGTGCT AAATGACGTG
GAGCGTGAAG CTCAGATTCG CTTGGATGCG GACCAATACA TACCTTATCC GCTAGATGAT
GTCAATTTGG ACTTTGAGGT ATTGGGTCCG TCGCTTATAA ATGACGATAT GGTGCAAGTG
TTACTTGCTG CCTCTCGCTC AGAAAACGTC GATCAAAGGG TTGATGCCTT GACATTCGGT
GGTCTGCAAA CCAAAGTGAT GGATATTGAG TCTCATGCCA TTGAGCGTGC TTTTGGCTTG
ATGGTAGACA GTCTGCCAAA CTTGCCAGAG TTGGTGGCGT TGGTCGATAT CGGACACAAT
CAAACAACTT TATATGTCGC CAAAAATGGC GAATTCATCT ATAGCCGTGA GCAGCTATTT
GGTGGTAGCC AGCTGACGGA AGCCATCCAA AACCGCTATG GTTTGTCTGC TGAAGAAGCT
TCTATTAGTC AGCGCGAGCA TGCCTTACCT GAAGATTACT ATCCCGATGT CTTAACGCCA
TTTATAGAAA ATACCATTCA ACAAATCACT CGCTCTTTAC AGTTTTATTT TTCTTCAAGT
CAATATAGTA GTATCGACCA TGTGGTCCTT GCTGGTGGTA GCAGCGCCAT AGCAGGTCTT
GCTGGTATGG CGCAGCAAAG ATTGGGCGTG CCTGTGAGTA TTGCAAATCC GTTCATTAAT
ATGACCATCG CTCCGCATAT CGATCATGAG CAACTAGCGA TTGATGCACC CAGTTTAATG
GCCGCTTGCG GTCTGGCGTT AAGGAGCTTT GACTAA
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| Protein sequence | MRLFTSKSRY LIGVDIGTTS VKLVDIQRQQ GVFHLRSYGT EILSEGIVID KLIVDTEAVG
NTIAGLARRC QAVGSSAATA VSGSAVITKI IDMDMVLNDV EREAQIRLDA DQYIPYPLDD
VNLDFEVLGP SLINDDMVQV LLAASRSENV DQRVDALTFG GLQTKVMDIE SHAIERAFGL
MVDSLPNLPE LVALVDIGHN QTTLYVAKNG EFIYSREQLF GGSQLTEAIQ NRYGLSAEEA
SISQREHALP EDYYPDVLTP FIENTIQQIT RSLQFYFSSS QYSSIDHVVL AGGSSAIAGL
AGMAQQRLGV PVSIANPFIN MTIAPHIDHE QLAIDAPSLM AACGLALRSF D
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