| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1882 |
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| Symbol | pilN |
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| ID | 3515851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2319080 |
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| End bp | 2319745 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670579 |
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| Product | type IV pilus biogenesis fimbrial assembly |
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| Protein accession | YP_265164 |
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| Protein GI | 71066437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.102317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TTAACCTACT GCCTTGGCGG CAAGAAGAGC GTGCCCGCCG TAATAAAGAG
TTTATCACCT TGGTGGTGGC AGTGACGCTG CTGTCTCTGC TGGTGGCATT TGCGACTTGG
AGTTATTTTA ATAATGAACT TGATGAGCAA TTAGCTGCCA ATGCGCTAAT AGAACAAGAA
AACGCTCGCT TAGATAAGGC GTTGGTCGAG ATTGATAGCT TAGAGCAGCG CCGTGAAGAT
ATTATCTCAC GTATGCAGGT TATTCAAGAC CTGCAAGGTC GACGTCCTGT ACCTGTACGT
TTATGGGATG ATCTTGCTAA AGCCATTCCG CCAGCGCTTT ATTTAAATAA CTTAAAGCGT
GAAGGGGATG TGCTGACGTT GACAGGTCTT GCTGACAATC CAAACGTTGT ATCGAGCTTG
ATTCGTAATC TTGATAACAG TAAATGGATG GGCAACTCAG CCGTTAGTAA TATTCAGCAA
AACATTACGG CTTATCAAGC CGCGCCGGTC TTAGAAAATA CGGTCACTAC GCCTGGTGAA
CAGCAGCGTC CTATTTATCC TGAAGACAGC TATGTACAGT TTGTGATCAC GACCAAAGTA
CAGTCTGCAA CGGCCGTTCC TGTAGAAGGT GTTGATGGCG CTGTTGGACT TGGAGGTGAG
TTATGA
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| Protein sequence | MARINLLPWR QEERARRNKE FITLVVAVTL LSLLVAFATW SYFNNELDEQ LAANALIEQE
NARLDKALVE IDSLEQRRED IISRMQVIQD LQGRRPVPVR LWDDLAKAIP PALYLNNLKR
EGDVLTLTGL ADNPNVVSSL IRNLDNSKWM GNSAVSNIQQ NITAYQAAPV LENTVTTPGE
QQRPIYPEDS YVQFVITTKV QSATAVPVEG VDGAVGLGGE L
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