| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1881 |
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| Symbol | pilO |
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| ID | 3515850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2318355 |
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| End bp | 2319083 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670578 |
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| Product | type IV pilus biogenesis |
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| Protein accession | YP_265163 |
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| Protein GI | 71066436 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00049939 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGA CCCGTAAAAA AACCCGCATT AAAATTAAAA AGACGGCGAT AAAGCCAAAA
AAACAGTTTG ATTTAAATGA ATTTCGCCGC AGTTTTGAGT CATTGGATTC TGAAAACTAC
GGCAGTTGGC CGCTTCCTGT AAAAGTAACC ATCATTGGAT TCATTATTGC GATGATTGCA
GTGTTGTCCT GGGCGCTACC GATTAGTAGT AAAATCGATG AAATTACAGC AGCAGAAAGC
CAACAACAAA CGTTGCTTGA TAGCTACCGT GAAAAAGAAT CACGCGCGCG CCATCTACAA
GCTTATCAAG CACAAGTGCT CCAAATGGAA GCGGAGTTTA AGGCTTTACT TGACCAGCTA
CCAAAAGATA CGCGCGTATC AGAATTGGTT GAGGGTATCA ATATGACGGG CGTGGGCAGT
AATATACGTT TTCAGGACAT ATCCGTTGAG CCTGAAATTG AAAACGAATT CTTTATTGAG
CAGCCTATTC GTATCGCAGC GTTGGGCGAC TATCATCAGT TTGGTAGCTT TATCAGTGGT
TTGGCGGCTT TACCAAGGAT TATCACCATG CACGATTTTG AAGTCAGTAA TCCGCAGCCA
ACCTTAGATG TTTTACCCGA GCTGAATTTG GTGTTGCAAA CTAAAACCTA TCGCTCAAAA
GAAGCAGACC CTGAAGGTGA TGCAGCGGCT GCTGAAGCTG CGCCCACTGC TGCTGCAGGA
GGCAACTGA
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| Protein sequence | MKLTRKKTRI KIKKTAIKPK KQFDLNEFRR SFESLDSENY GSWPLPVKVT IIGFIIAMIA
VLSWALPISS KIDEITAAES QQQTLLDSYR EKESRARHLQ AYQAQVLQME AEFKALLDQL
PKDTRVSELV EGINMTGVGS NIRFQDISVE PEIENEFFIE QPIRIAALGD YHQFGSFISG
LAALPRIITM HDFEVSNPQP TLDVLPELNL VLQTKTYRSK EADPEGDAAA AEAAPTAAAG
GN
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