Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1878 |
Symbol | aroK |
ID | 3515847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2314791 |
End bp | 2315351 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637670575 |
Product | shikimate kinase |
Protein accession | YP_265160 |
Protein GI | 71066433 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.190429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGG AATTACCGTC GGTATTTTTG GTAGGGCCGA TGGGAGCAGG GAAGACCACA ATCGGCAGAT TACTGGCAAA GCAGCTCGGG CGGACGTTTG TAGACAGTGA TTGGTATGTT GAGTCGCAGA CCGGCGCTGA TATTGCTTGG ATATTCGACA AAGAAGGTGA AGCGGGCTTT CGCGAACGTG AAACGCGCGC GATAGATGAG CTGACGCAGC AACCGCAAAT TGTCTTAGCG ACAGGCGGCG GCGCTGTGAT GGCAGCTGAA AATCGTGAAT TTTTAAAGCA GCGCGGTATC GTCATTTATC TCAATGCGCC TGTCGATGTG CAAATGGCTC GTACCGCTAA AGACAAATCG CGTCCTTTAT TACAACAGCC TAACCCTAGA AAAATACTGC AAGGTTTATA CAGCGCGCGT GATCCTTTAT ATCGTCAAGT GGCGCATATT ATTATGCCAA CAGGGCATAC GTATCCACGG CACATGGTCA ATCAGTTATT ACAGCAGCTT AACTCATTTT GCGCCTCTAC GTCTGTCGTT TCAGAACCTG AAAAAGACTG A
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Protein sequence | MVEELPSVFL VGPMGAGKTT IGRLLAKQLG RTFVDSDWYV ESQTGADIAW IFDKEGEAGF RERETRAIDE LTQQPQIVLA TGGGAVMAAE NREFLKQRGI VIYLNAPVDV QMARTAKDKS RPLLQQPNPR KILQGLYSAR DPLYRQVAHI IMPTGHTYPR HMVNQLLQQL NSFCASTSVV SEPEKD
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