| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1877 |
|---|
| Symbol | aroB |
|---|
| ID | 3515846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2313403 |
|---|
| End bp | 2314569 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637670574 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_265159 |
|---|
| Protein GI | 71066432 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.384735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC CACTGTTTCA TGCTGACTTG ACAGTACATA CACAAAGTCA TGACTATCCA
ATCGTCATTA CTGAAAATAC AGCTACTGAA AATGCAATAG CAGAAGAGAG TAGCATGGCT
AGCCAAGTTG CCCCTTATAT TGCCGGCCAG CAGGTATTGA TAGTTACCAA TGAGACCATT
GCGCCGCTTT ATTTAAAAGC CCTAAAACAG CCATTAGAAG TCCAATTCAC CGTGCAGGTT
TGTGTGCTGC CAGATGGTGA GCAATATAAA AACCAGTCCA GTATCAATCA GATTTATGAT
GTATTGATGG CAGCGCATTT TAATCGTGAT GTGACCCTGA TTGCGCTTGG CGGTGGTGTA
ATTGGTGATA TGACAGGATT TTCGGCGGCA AGCTTTATGC GCGGCGTCAA TTTTATCCAA
ATACCAACCA CCTTGCTGTC GCAAGTGGAT TCAAGTGTTG GCGGCAAAAC TGGCATCAAT
CATCCACAAG GCAAAAACAT GATTGGGGCA TTTTGGCAGC CGCAAATGGT ATTGGCGGAT
ATGAGTACGC TCAAAACTTT GCCAGCTCGC GAGCTATCAG CAGGACTTGC TGAAGTCATC
AAATATGCGC TGATTATGGA TGCGGATTTT TTAACTTGGC TTGAGCACAA TCTGCCTGCG
ATGATGGCAT TGAACTTGGT GATACTTGGT GAAGCAGTCA AGCGCTGCTG TGAATACAAA
GCGGATATCG TCGCTCAAGA TGAAAGAGAG TCGGGCGTAC GCGCACTATT GAACTTTGGT
CACACCTTTG GTCACGTGAT TGAAACCCAT GAAGGTTACG GTAATTGGTT GCATGGTGAA
GCGGTCGCGG CAGGTATGGT ACAAGCGGCT GAGCTGTCGC AAAAAATCGG CTGGTTAACG
AGTGATGAAG TCGCCCGCGT CAAGCGCGTA TTATTGTTAG CCAATTTACC CATTACACCG
CCACCTATTG CCGTGCAAAC GGCTTTGAAC CTAATGGGTC ATGATAAAAA AGTGAAACAC
GGACAAATCC GTCTTATTTT GTTAAAATCA TTGGGTGAAG CGGTATTAAC CAATGATTTT
GACCCAGATT TGCTCACTGA TGTGCTGTCA CAACATGCTA TTCATGCTAA AGATGACGCG
CAAGCGACAA CGGCAACCGT GTTATAA
|
|---|
| Protein sequence | MATPLFHADL TVHTQSHDYP IVITENTATE NAIAEESSMA SQVAPYIAGQ QVLIVTNETI
APLYLKALKQ PLEVQFTVQV CVLPDGEQYK NQSSINQIYD VLMAAHFNRD VTLIALGGGV
IGDMTGFSAA SFMRGVNFIQ IPTTLLSQVD SSVGGKTGIN HPQGKNMIGA FWQPQMVLAD
MSTLKTLPAR ELSAGLAEVI KYALIMDADF LTWLEHNLPA MMALNLVILG EAVKRCCEYK
ADIVAQDERE SGVRALLNFG HTFGHVIETH EGYGNWLHGE AVAAGMVQAA ELSQKIGWLT
SDEVARVKRV LLLANLPITP PPIAVQTALN LMGHDKKVKH GQIRLILLKS LGEAVLTNDF
DPDLLTDVLS QHAIHAKDDA QATTATVL
|
|---|
| |