Gene Psyc_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1874 
SymbolgltB 
ID3515843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2306818 
End bp2311281 
Gene Length4464 bp 
Protein Length1487 aa 
Translation table11 
GC content47% 
IMG OID637670571 
Productglutamate synthase subunit alpha 
Protein accessionYP_265156 
Protein GI71066429 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGA TCTCCTCCCA TACGCATTTG GCCTCGCCAG ATGATTTTTC TGACAATTGC 
GGCTTTGGTT TGATTGCTCA TATTGAGGGT CAGGCCAGTC ATGACTTGGT AAAAAAAGCC
ATTCATAGTT TAAGTTGTAT GACCCATCGT GGCGGCGTTG CGGCTGATGG TAAAACTGGT
GATGGTTGTG GTTTATTATT AGCAACACCT GTTGCTTTTT TTAAAGACAT TGCGGCAGAT
CAGCAGTTTA AGTTAACAGA CAACTTTGCC GTTGGCATGG TGTTCGTTAA TGATGATAAA
ACCCAAGCAC AGCATAGCCA GCAAGTACTA AGTGACGAGA TTATCGCGCA AGGACTAGAG
GTAGCTGGCT GGCGCGATGT GCCGCTTGAT TTAAGCATTG TTGGTGAAAT TGGGCGTCAG
ACATTACCGG ATTTTAAGCA GGTATTTGTC AATGCGCCTG ATAATCTGGC TGCAGATGAC
TTTAACCGTA AGCTGTTTGT GGCGCGTAAA AAAGCCGAGC AGCGCTTAGA TAATGACGAG
CTGTTTTATG TGTGCTCATT GAGTTGTCAG ACTATTATTT ATAAAGGTCT GGTGATGCCA
TCAGATCTGC CGGCTTTCTT CTTAGATTTG CAAGATGAGC GTTTGGCATC GCATATTGTG
GTATTCCATC AACGTTTTTC AACCAATACG CTGCCGCGCT GGCCATTGGC ACAGCCTTTT
CGCTATTTGG CACATAATGG TGAGCTGAAC ACTATCACGG GTAACCGCAG CTGGTCTGAG
GCGCGTACGC CAAAGTTAAA ATCAGAAAAA CTGCCCAATT TGAACGAATT AACGCCATTG
GTAAATAGCA GTGGCTCAGA TTCATCTAGC TTAGACAATA TGCTGGAAGT TCTGATGTCA
GGTGGTATGA GCTTGTTTCA TTCGATGTCG ATTCTGGTGC CACCAGCTTG GCAAAATGTC
GACAGCATGG ATATGGATTT GCGGGCATTT TATGAGTTTT ACTCACAGCA TATGGAAGCA
TGGGATGGTC CGGCAGGTCT TGTTATTCAA GATGGTCGCT ATGCGGTCTG TATGCTGGAT
CGAAACGGTC TGCGTCCATC ACGCTGGGTG ACGACGAAGA ATGGTTATAT TACAGTTGCA
TCAGAAGTAG GCGTTTGGGA CTATAAGCCA AAAGACGTGC TCGCTAAAGG TCGTGTCGGA
CCGGGTCAGA TGCTGGTCAT CGATACGCAA ACCGGTCAAA TCATGGATAC TAAGGCGATT
GCGACCTTGC TTAAAAAGGC ACATCCATAT CGTAAATGGT TACGTGACGA GGCGACCCGT
ATTCGTGATG ATGAGCGCTT GGAAGAAGAG CTAGCCGCGC AGGCATGTCG CGGCGAGCCA
CTAAAAGCAT TGCAAAAAAT GTATCACATT ACCAAGGAAG AACGCACAGA AATCATTCGT
CCTAATGCCG AAAATGCGCA AGAGCCAGTT GGTTCGATGG GTGATGATAC GCCAATGGCA
GTGCTATCGC AGCAGATTCG TCATGTTGGT GATTTCTTCC GCCAGCAGTT TGCACAGGTG
ACCAATCCAC CTATTGATCC GCTACGTGAA TCTATCGTAA TGTCACTACA GACCTGTCTT
GGTGCTGAAA CCAATGTGTT TGCACCATCA GCACGCGACG CGCATCGCCT TATCTTATCG
TCGCCGGTGT TGTCGGCAAG TAAGATGCAG CAACTTGAAA CCTTGGATGA TCCTGCCTTT
AAGCTGGCAC GTATCGACTT AAATTATGAG GGTACGCTAG AGCTTTCCGC AGCTATTGTT
GCTATCTGTG AGCAAGTTGC CAGCAGCATT CGCGCAGGTC ATACCTTGAT TGTCTTATCT
GATAAAGACA TTGCGGTAGA TAAAGTCCCT GCCAATGCCA TGATGGTCAC AGGCGCAGTA
CATCATTATC TGATCGCTCA AGGTATTCGT ACCGATGCCA ATTTAATTAT CGAGACTGGT
CTTGCTCGTG ACTCGCATCA AGTAGCGGTC TTGATTGGAT TTGGCGCGAC CTGCGTATAT
CCTTATCTGG CTTATGACGT GATTGATGAT TTGGTTGCGA CTGGCGAGCT GCTTGGTGAT
CCGATTCAGG CGCGGATGAA TTTCCGTAAA GGCTTAGACA AAGGTTTGCT GAAAATCTTA
TCAAAAATGG GTATCTCTAC CATTGTTTCG TATCGCGGTG CGCAGTTATT TGAAGCGGTG
GGTCTCTCTG AAGAAGTCGT TAACCTGTGC TTTAAAGGCG TGCAAAGTCG TATTAAAGGC
GCAACCTTTG CTGATTTGGC AGTAGATCAA GCGCAGCTCG CGGCAAATGC CTTTAAGCGT
CGTGCACCAC TTGATCAAGG CGGCTTATTA AAGTTTGTCT TTAATAAAGA GTATCATGCT
TTTAATCCTG ATGTGATTAA TAGTCTACAT CTGGCGGTAC GAACTGGTAA TTATGACAAT
TATCGTCAGT ATGCAGAAAT CGTTAATAGC CGTCCGGTCG CTACTTTACG TGATTTATTA
CAGCTTAAAA CGGATAATCC TCTTGAAGTA GATGAGGTTG AAGATATCTC AGCCATTTTG
TCGCGTTTTG ACTCCGCTGG CATGTCGCTA GGCGCATTGT CGCCAGAAGC GCATGAAGCC
ATTGCTATCG CTATGAATAC CATTGGTGGT CGCTCAAACT CAGGTGAGGG CGGTGAAGAC
CCTGTACGTT ACGGTACCTT ACGTAACTCA AAAATTAAGC AAATTGCCTC TGGTCGTTTT
GGTGTGACGC CCGCGTATCT ACGCTCAGCA GAAGTCATGC AAATCAAAGT CGCTCAAGGG
GCAAAACCTG GTGAAGGTGG TCAGCTGCCA GGTGGCAAGG TAAATGCCTT GATTGCACGC
CTGCGTTATT CGGTGCCTGG AGTGACGTTG ATTTCACCGC CGCCGCATCA TGATATTTAC
TCGATTGAAG ATTTGGCGCA GCTTATTTTT GATCTTAAGC AAGTCAATCC AGATGCGCTG
GTGTCGGTCA AGTTGGTCTC GCGCCCGGGT GTTGGCACGA TTGCAACTGG TGTGGCAAAA
GCCTATGCTG ACTTGATTAC TATCTCAGGT TATGACGGCG GTACGGCAGC ATCGCCACTG
TCGTCTATCC ATCATGCTGG CTCGCCTTGG GAGCTGGGTC TTGCCGAAAC CCATCAATCA
TTACGAGTGA ATGGCTTGCG TCATAAAGTT CGTATTCAAA CCGATGGCGG TCTAAAGACA
GGACTTGATG TGGTCAAAGC CGCCATTCTT GGTGCTGAAA GCTTCGGTTT TGGTACCACG
CCGATGATAG CCGTTGGTTG TAAATATCTA CGCATTTGCC ATTTAAATAA CTGCCCAACG
GGTGTTGCCA CTCAAAAAGC CCAACTGCGC GATGATCACT TTATCGGTGA AGCTGAAATG
CTGATTAACT TCTTTAAGTT TGTCGCAACC GAGACGCGCG AATGGCTTGC AAAGCTTGGC
GTGCGCACGA TGGAAGAGTT GGTTGGACGT ACTGACTTAC TTGATATATT AGAAGGCAAC
ACGGCTAAGC AGCAGCATCT TGATTTATCG CCTTTACTGT TTAGCCATCC TGCTAGTAGC
GGCAAAGCAC AAACCTGTCA GGTTGAGCGC AATGAGCCAT TTGACAAAGG CTTGCTTGCT
GAACAAATGA TTAGCGATAT GCTGCTTAAT ATTCGTCAAG GCAATGGTGG TGACTACAGT
TATTACGTTG GCAACTGTGA TCGCTCGATT GGGGCGCGTA TCTCAGGTGA GATTGCACAA
GTATGGGGCA ATCTTGGCAT GAGTGACAAA CCCATTAAGC TGCACTTGAC CGGAACAGCA
GGGCAAAGCT TAGGCGTTTG GAATGCTGGC GGCCTGCACA TTGAGCTAGA AGGCGACGCC
AATGATTATG TCGGTAAAGG CATGGCGGGC GGCGAGATTG TGATTTATCC ACCAAAAGAC
TCAAGCTTTG TGACGCAGGA TACAGCCATT ATTGGTAATA CTTGCTTATA TGGCGCAACA
GGTGGCAAGC TATATGCTGC GGGTACGGCA GGGGAGCGTT TTGGTGTTCG TAACTCAGGT
GCTCATGCGG TCATTGAAGG CACAGGGGAT CATTGCTGCG AGTATATGAC TGGCGGTATC
ATCACAATAC TTGGACGTAC CGGTCTCAAC TTTGGCGCAG GTATGACGGG CGGATTTGCC
TATGTGCTCG ATATGGAAGG TGATTTCTTT GATCGCTGCA ATCATGAGCT GATTGATTTA
AATCGTATCT CAAGCGAGCA GATGGAAAGC CACCGTATCT ACTTACAGCA AGTCATCGAA
AGACATGTCG ATAAAACGGG TAGCGCATGG GGGCAGGCAA TATTGGTGGA CTTTGAGCAT
TATGCGCGTA AGTTCTACTT GGTTAAGCCA AAAGCAGCAA ACGTTGCTAC TTTGCTTAAG
ACCACGACCG CTGATCCGCA ATAA
 
Protein sequence
MSMISSHTHL ASPDDFSDNC GFGLIAHIEG QASHDLVKKA IHSLSCMTHR GGVAADGKTG 
DGCGLLLATP VAFFKDIAAD QQFKLTDNFA VGMVFVNDDK TQAQHSQQVL SDEIIAQGLE
VAGWRDVPLD LSIVGEIGRQ TLPDFKQVFV NAPDNLAADD FNRKLFVARK KAEQRLDNDE
LFYVCSLSCQ TIIYKGLVMP SDLPAFFLDL QDERLASHIV VFHQRFSTNT LPRWPLAQPF
RYLAHNGELN TITGNRSWSE ARTPKLKSEK LPNLNELTPL VNSSGSDSSS LDNMLEVLMS
GGMSLFHSMS ILVPPAWQNV DSMDMDLRAF YEFYSQHMEA WDGPAGLVIQ DGRYAVCMLD
RNGLRPSRWV TTKNGYITVA SEVGVWDYKP KDVLAKGRVG PGQMLVIDTQ TGQIMDTKAI
ATLLKKAHPY RKWLRDEATR IRDDERLEEE LAAQACRGEP LKALQKMYHI TKEERTEIIR
PNAENAQEPV GSMGDDTPMA VLSQQIRHVG DFFRQQFAQV TNPPIDPLRE SIVMSLQTCL
GAETNVFAPS ARDAHRLILS SPVLSASKMQ QLETLDDPAF KLARIDLNYE GTLELSAAIV
AICEQVASSI RAGHTLIVLS DKDIAVDKVP ANAMMVTGAV HHYLIAQGIR TDANLIIETG
LARDSHQVAV LIGFGATCVY PYLAYDVIDD LVATGELLGD PIQARMNFRK GLDKGLLKIL
SKMGISTIVS YRGAQLFEAV GLSEEVVNLC FKGVQSRIKG ATFADLAVDQ AQLAANAFKR
RAPLDQGGLL KFVFNKEYHA FNPDVINSLH LAVRTGNYDN YRQYAEIVNS RPVATLRDLL
QLKTDNPLEV DEVEDISAIL SRFDSAGMSL GALSPEAHEA IAIAMNTIGG RSNSGEGGED
PVRYGTLRNS KIKQIASGRF GVTPAYLRSA EVMQIKVAQG AKPGEGGQLP GGKVNALIAR
LRYSVPGVTL ISPPPHHDIY SIEDLAQLIF DLKQVNPDAL VSVKLVSRPG VGTIATGVAK
AYADLITISG YDGGTAASPL SSIHHAGSPW ELGLAETHQS LRVNGLRHKV RIQTDGGLKT
GLDVVKAAIL GAESFGFGTT PMIAVGCKYL RICHLNNCPT GVATQKAQLR DDHFIGEAEM
LINFFKFVAT ETREWLAKLG VRTMEELVGR TDLLDILEGN TAKQQHLDLS PLLFSHPASS
GKAQTCQVER NEPFDKGLLA EQMISDMLLN IRQGNGGDYS YYVGNCDRSI GARISGEIAQ
VWGNLGMSDK PIKLHLTGTA GQSLGVWNAG GLHIELEGDA NDYVGKGMAG GEIVIYPPKD
SSFVTQDTAI IGNTCLYGAT GGKLYAAGTA GERFGVRNSG AHAVIEGTGD HCCEYMTGGI
ITILGRTGLN FGAGMTGGFA YVLDMEGDFF DRCNHELIDL NRISSEQMES HRIYLQQVIE
RHVDKTGSAW GQAILVDFEH YARKFYLVKP KAANVATLLK TTTADPQ