Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1874 |
Symbol | gltB |
ID | 3515843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2306818 |
End bp | 2311281 |
Gene Length | 4464 bp |
Protein Length | 1487 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637670571 |
Product | glutamate synthase subunit alpha |
Protein accession | YP_265156 |
Protein GI | 71066429 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATGA TCTCCTCCCA TACGCATTTG GCCTCGCCAG ATGATTTTTC TGACAATTGC GGCTTTGGTT TGATTGCTCA TATTGAGGGT CAGGCCAGTC ATGACTTGGT AAAAAAAGCC ATTCATAGTT TAAGTTGTAT GACCCATCGT GGCGGCGTTG CGGCTGATGG TAAAACTGGT GATGGTTGTG GTTTATTATT AGCAACACCT GTTGCTTTTT TTAAAGACAT TGCGGCAGAT CAGCAGTTTA AGTTAACAGA CAACTTTGCC GTTGGCATGG TGTTCGTTAA TGATGATAAA ACCCAAGCAC AGCATAGCCA GCAAGTACTA AGTGACGAGA TTATCGCGCA AGGACTAGAG GTAGCTGGCT GGCGCGATGT GCCGCTTGAT TTAAGCATTG TTGGTGAAAT TGGGCGTCAG ACATTACCGG ATTTTAAGCA GGTATTTGTC AATGCGCCTG ATAATCTGGC TGCAGATGAC TTTAACCGTA AGCTGTTTGT GGCGCGTAAA AAAGCCGAGC AGCGCTTAGA TAATGACGAG CTGTTTTATG TGTGCTCATT GAGTTGTCAG ACTATTATTT ATAAAGGTCT GGTGATGCCA TCAGATCTGC CGGCTTTCTT CTTAGATTTG CAAGATGAGC GTTTGGCATC GCATATTGTG GTATTCCATC AACGTTTTTC AACCAATACG CTGCCGCGCT GGCCATTGGC ACAGCCTTTT CGCTATTTGG CACATAATGG TGAGCTGAAC ACTATCACGG GTAACCGCAG CTGGTCTGAG GCGCGTACGC CAAAGTTAAA ATCAGAAAAA CTGCCCAATT TGAACGAATT AACGCCATTG GTAAATAGCA GTGGCTCAGA TTCATCTAGC TTAGACAATA TGCTGGAAGT TCTGATGTCA GGTGGTATGA GCTTGTTTCA TTCGATGTCG ATTCTGGTGC CACCAGCTTG GCAAAATGTC GACAGCATGG ATATGGATTT GCGGGCATTT TATGAGTTTT ACTCACAGCA TATGGAAGCA TGGGATGGTC CGGCAGGTCT TGTTATTCAA GATGGTCGCT ATGCGGTCTG TATGCTGGAT CGAAACGGTC TGCGTCCATC ACGCTGGGTG ACGACGAAGA ATGGTTATAT TACAGTTGCA TCAGAAGTAG GCGTTTGGGA CTATAAGCCA AAAGACGTGC TCGCTAAAGG TCGTGTCGGA CCGGGTCAGA TGCTGGTCAT CGATACGCAA ACCGGTCAAA TCATGGATAC TAAGGCGATT GCGACCTTGC TTAAAAAGGC ACATCCATAT CGTAAATGGT TACGTGACGA GGCGACCCGT ATTCGTGATG ATGAGCGCTT GGAAGAAGAG CTAGCCGCGC AGGCATGTCG CGGCGAGCCA CTAAAAGCAT TGCAAAAAAT GTATCACATT ACCAAGGAAG AACGCACAGA AATCATTCGT CCTAATGCCG AAAATGCGCA AGAGCCAGTT GGTTCGATGG GTGATGATAC GCCAATGGCA GTGCTATCGC AGCAGATTCG TCATGTTGGT GATTTCTTCC GCCAGCAGTT TGCACAGGTG ACCAATCCAC CTATTGATCC GCTACGTGAA TCTATCGTAA TGTCACTACA GACCTGTCTT GGTGCTGAAA CCAATGTGTT TGCACCATCA GCACGCGACG CGCATCGCCT TATCTTATCG TCGCCGGTGT TGTCGGCAAG TAAGATGCAG CAACTTGAAA CCTTGGATGA TCCTGCCTTT AAGCTGGCAC GTATCGACTT AAATTATGAG GGTACGCTAG AGCTTTCCGC AGCTATTGTT GCTATCTGTG AGCAAGTTGC CAGCAGCATT CGCGCAGGTC ATACCTTGAT TGTCTTATCT GATAAAGACA TTGCGGTAGA TAAAGTCCCT GCCAATGCCA TGATGGTCAC AGGCGCAGTA CATCATTATC TGATCGCTCA AGGTATTCGT ACCGATGCCA ATTTAATTAT CGAGACTGGT CTTGCTCGTG ACTCGCATCA AGTAGCGGTC TTGATTGGAT TTGGCGCGAC CTGCGTATAT CCTTATCTGG CTTATGACGT GATTGATGAT TTGGTTGCGA CTGGCGAGCT GCTTGGTGAT CCGATTCAGG CGCGGATGAA TTTCCGTAAA GGCTTAGACA AAGGTTTGCT GAAAATCTTA TCAAAAATGG GTATCTCTAC CATTGTTTCG TATCGCGGTG CGCAGTTATT TGAAGCGGTG GGTCTCTCTG AAGAAGTCGT TAACCTGTGC TTTAAAGGCG TGCAAAGTCG TATTAAAGGC GCAACCTTTG CTGATTTGGC AGTAGATCAA GCGCAGCTCG CGGCAAATGC CTTTAAGCGT CGTGCACCAC TTGATCAAGG CGGCTTATTA AAGTTTGTCT TTAATAAAGA GTATCATGCT TTTAATCCTG ATGTGATTAA TAGTCTACAT CTGGCGGTAC GAACTGGTAA TTATGACAAT TATCGTCAGT ATGCAGAAAT CGTTAATAGC CGTCCGGTCG CTACTTTACG TGATTTATTA CAGCTTAAAA CGGATAATCC TCTTGAAGTA GATGAGGTTG AAGATATCTC AGCCATTTTG TCGCGTTTTG ACTCCGCTGG CATGTCGCTA GGCGCATTGT CGCCAGAAGC GCATGAAGCC ATTGCTATCG CTATGAATAC CATTGGTGGT CGCTCAAACT CAGGTGAGGG CGGTGAAGAC CCTGTACGTT ACGGTACCTT ACGTAACTCA AAAATTAAGC AAATTGCCTC TGGTCGTTTT GGTGTGACGC CCGCGTATCT ACGCTCAGCA GAAGTCATGC AAATCAAAGT CGCTCAAGGG GCAAAACCTG GTGAAGGTGG TCAGCTGCCA GGTGGCAAGG TAAATGCCTT GATTGCACGC CTGCGTTATT CGGTGCCTGG AGTGACGTTG ATTTCACCGC CGCCGCATCA TGATATTTAC TCGATTGAAG ATTTGGCGCA GCTTATTTTT GATCTTAAGC AAGTCAATCC AGATGCGCTG GTGTCGGTCA AGTTGGTCTC GCGCCCGGGT GTTGGCACGA TTGCAACTGG TGTGGCAAAA GCCTATGCTG ACTTGATTAC TATCTCAGGT TATGACGGCG GTACGGCAGC ATCGCCACTG TCGTCTATCC ATCATGCTGG CTCGCCTTGG GAGCTGGGTC TTGCCGAAAC CCATCAATCA TTACGAGTGA ATGGCTTGCG TCATAAAGTT CGTATTCAAA CCGATGGCGG TCTAAAGACA GGACTTGATG TGGTCAAAGC CGCCATTCTT GGTGCTGAAA GCTTCGGTTT TGGTACCACG CCGATGATAG CCGTTGGTTG TAAATATCTA CGCATTTGCC ATTTAAATAA CTGCCCAACG GGTGTTGCCA CTCAAAAAGC CCAACTGCGC GATGATCACT TTATCGGTGA AGCTGAAATG CTGATTAACT TCTTTAAGTT TGTCGCAACC GAGACGCGCG AATGGCTTGC AAAGCTTGGC GTGCGCACGA TGGAAGAGTT GGTTGGACGT ACTGACTTAC TTGATATATT AGAAGGCAAC ACGGCTAAGC AGCAGCATCT TGATTTATCG CCTTTACTGT TTAGCCATCC TGCTAGTAGC GGCAAAGCAC AAACCTGTCA GGTTGAGCGC AATGAGCCAT TTGACAAAGG CTTGCTTGCT GAACAAATGA TTAGCGATAT GCTGCTTAAT ATTCGTCAAG GCAATGGTGG TGACTACAGT TATTACGTTG GCAACTGTGA TCGCTCGATT GGGGCGCGTA TCTCAGGTGA GATTGCACAA GTATGGGGCA ATCTTGGCAT GAGTGACAAA CCCATTAAGC TGCACTTGAC CGGAACAGCA GGGCAAAGCT TAGGCGTTTG GAATGCTGGC GGCCTGCACA TTGAGCTAGA AGGCGACGCC AATGATTATG TCGGTAAAGG CATGGCGGGC GGCGAGATTG TGATTTATCC ACCAAAAGAC TCAAGCTTTG TGACGCAGGA TACAGCCATT ATTGGTAATA CTTGCTTATA TGGCGCAACA GGTGGCAAGC TATATGCTGC GGGTACGGCA GGGGAGCGTT TTGGTGTTCG TAACTCAGGT GCTCATGCGG TCATTGAAGG CACAGGGGAT CATTGCTGCG AGTATATGAC TGGCGGTATC ATCACAATAC TTGGACGTAC CGGTCTCAAC TTTGGCGCAG GTATGACGGG CGGATTTGCC TATGTGCTCG ATATGGAAGG TGATTTCTTT GATCGCTGCA ATCATGAGCT GATTGATTTA AATCGTATCT CAAGCGAGCA GATGGAAAGC CACCGTATCT ACTTACAGCA AGTCATCGAA AGACATGTCG ATAAAACGGG TAGCGCATGG GGGCAGGCAA TATTGGTGGA CTTTGAGCAT TATGCGCGTA AGTTCTACTT GGTTAAGCCA AAAGCAGCAA ACGTTGCTAC TTTGCTTAAG ACCACGACCG CTGATCCGCA ATAA
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Protein sequence | MSMISSHTHL ASPDDFSDNC GFGLIAHIEG QASHDLVKKA IHSLSCMTHR GGVAADGKTG DGCGLLLATP VAFFKDIAAD QQFKLTDNFA VGMVFVNDDK TQAQHSQQVL SDEIIAQGLE VAGWRDVPLD LSIVGEIGRQ TLPDFKQVFV NAPDNLAADD FNRKLFVARK KAEQRLDNDE LFYVCSLSCQ TIIYKGLVMP SDLPAFFLDL QDERLASHIV VFHQRFSTNT LPRWPLAQPF RYLAHNGELN TITGNRSWSE ARTPKLKSEK LPNLNELTPL VNSSGSDSSS LDNMLEVLMS GGMSLFHSMS ILVPPAWQNV DSMDMDLRAF YEFYSQHMEA WDGPAGLVIQ DGRYAVCMLD RNGLRPSRWV TTKNGYITVA SEVGVWDYKP KDVLAKGRVG PGQMLVIDTQ TGQIMDTKAI ATLLKKAHPY RKWLRDEATR IRDDERLEEE LAAQACRGEP LKALQKMYHI TKEERTEIIR PNAENAQEPV GSMGDDTPMA VLSQQIRHVG DFFRQQFAQV TNPPIDPLRE SIVMSLQTCL GAETNVFAPS ARDAHRLILS SPVLSASKMQ QLETLDDPAF KLARIDLNYE GTLELSAAIV AICEQVASSI RAGHTLIVLS DKDIAVDKVP ANAMMVTGAV HHYLIAQGIR TDANLIIETG LARDSHQVAV LIGFGATCVY PYLAYDVIDD LVATGELLGD PIQARMNFRK GLDKGLLKIL SKMGISTIVS YRGAQLFEAV GLSEEVVNLC FKGVQSRIKG ATFADLAVDQ AQLAANAFKR RAPLDQGGLL KFVFNKEYHA FNPDVINSLH LAVRTGNYDN YRQYAEIVNS RPVATLRDLL QLKTDNPLEV DEVEDISAIL SRFDSAGMSL GALSPEAHEA IAIAMNTIGG RSNSGEGGED PVRYGTLRNS KIKQIASGRF GVTPAYLRSA EVMQIKVAQG AKPGEGGQLP GGKVNALIAR LRYSVPGVTL ISPPPHHDIY SIEDLAQLIF DLKQVNPDAL VSVKLVSRPG VGTIATGVAK AYADLITISG YDGGTAASPL SSIHHAGSPW ELGLAETHQS LRVNGLRHKV RIQTDGGLKT GLDVVKAAIL GAESFGFGTT PMIAVGCKYL RICHLNNCPT GVATQKAQLR DDHFIGEAEM LINFFKFVAT ETREWLAKLG VRTMEELVGR TDLLDILEGN TAKQQHLDLS PLLFSHPASS GKAQTCQVER NEPFDKGLLA EQMISDMLLN IRQGNGGDYS YYVGNCDRSI GARISGEIAQ VWGNLGMSDK PIKLHLTGTA GQSLGVWNAG GLHIELEGDA NDYVGKGMAG GEIVIYPPKD SSFVTQDTAI IGNTCLYGAT GGKLYAAGTA GERFGVRNSG AHAVIEGTGD HCCEYMTGGI ITILGRTGLN FGAGMTGGFA YVLDMEGDFF DRCNHELIDL NRISSEQMES HRIYLQQVIE RHVDKTGSAW GQAILVDFEH YARKFYLVKP KAANVATLLK TTTADPQ
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