| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1870 |
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| Symbol | cof |
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| ID | 3515839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2301288 |
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| End bp | 2302085 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637670567 |
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| Product | class II-B haloacid dehalogenase |
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| Protein accession | YP_265152 |
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| Protein GI | 71066425 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.791968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.480034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATA AAACACCCAC TCCCAAAATC ATCTTTTTTG ACATCGATGA CACCTTAAGC
CGCAACGGTA TTATAGCCGC TCACAACCAA GCAACGCTTG AAGCGCTCGC CCAAACTGAT
ATTAAACTGG TGATTTCAAC CGGACGTTCC AAAGCCATAT TGCCTGCGGA TATACTAGCC
TTATTTGAGG CTGATGTATT CGACGCCATT ATCTGTATGA ATGGACAATA TAGCTTTAAT
AAAGATGGCA TGATTAGTCA TTATCCATTA ACAGCTACGC AGACTAACAA GATTGTCATG
CTATGCCAAA AAAGTGAACT CATTCACAAA TTTGACTCAG CGACTCATAT TGCATGGTCA
CATGAGAATG AGCGACTGCG TGAATACAAT GCAATCACGC CAAACTCTAT TCTTGACCCA
GACTATCATA AGGCAAATAC GGTTTATCAA TGTTCTGTAT TCTTTAACAA TCAAGAAGAG
AAAATGCAGG ATGTCGATTT TACTCAGGAT GATTTAAAAC TGGTACATTG GCATCATATT
GGCGCAGATA TATTACCAGC AGAAGCATCC AAAGCACGCG GTATCATAGA TTTATGCCTG
CATTACAATA TTGATGCGAA GGATTGTATG GCGTTTGGTG ACGGGTTGAA TGATTTAGAA
ATGTTTGATT TGGTCGGCTA TGCGGTGGCA ATGGGCGATG CAAAACCCGA GCTGATCGCG
CGTGCGGATT TTGTCACCGG TACGATTGAA GAGCATGGTA TTCAAGCGGT TGTTAAGCAC
TTACATATGG ACCAATAG
|
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| Protein sequence | MNNKTPTPKI IFFDIDDTLS RNGIIAAHNQ ATLEALAQTD IKLVISTGRS KAILPADILA
LFEADVFDAI ICMNGQYSFN KDGMISHYPL TATQTNKIVM LCQKSELIHK FDSATHIAWS
HENERLREYN AITPNSILDP DYHKANTVYQ CSVFFNNQEE KMQDVDFTQD DLKLVHWHHI
GADILPAEAS KARGIIDLCL HYNIDAKDCM AFGDGLNDLE MFDLVGYAVA MGDAKPELIA
RADFVTGTIE EHGIQAVVKH LHMDQ
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