Gene Psyc_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1858 
Symbol 
ID3515827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2285686 
End bp2286711 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content46% 
IMG OID637670555 
Producthypothetical protein 
Protein accessionYP_265140 
Protein GI71066413 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.685833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAT CACAATCACC ACGGCCAGAT GCCCAGTCAT CTTCCACCCC GTCATCTTCC 
ACCCAGTTAG ATAACCAACC TGTGGCTGAC GAAAGCAGCC CGATTTATAA AAATAGTCCC
AAGCAATTGC TAGGTGTCTA TGTTCGAGGC TTGGCAATGG GCGCTGCTGA CATTGTACCG
GGTGTCTCTG GTGGTACAAT CGCACTGATT GCTGGTATTT ATGAGCGCTT AATTAACGCT
TTGAGCAGTG TTGGTCCCAA TCTTTGGCAA GTCTTTCGTC AAGAGGGTGG TATCAAAGGT
TTAATAGCGG TATGGCGACA AGTCGATGCC ACTTTTTTAT TGTTCCTGTT GATGGGTGTT
GCCACTAGCC TTGCAACGCT TGCCAGTGTT ATTAAGCATT TATTAGATAA TCAGCCTTTG
ATGATTTGGT CATTCTTTTT TGGTTTGGTC ATCGCAACTG TTTTTCTTTT ATTAAGTGAG
ATTAAACGCT GGAATATCGG GCGGGCGTTA TTGTTCCTGC TTGGAGTAGC CAGCGCCGTT
ATTATTAGCA GCTTGCCTCT GATGAACACC ACACCAAGCT TGCCCTATCT TTTTGTTGCC
GGCGCTATCG CTATTTGTGC GATGATCCTA CCTGGCATAT CAGGATCCTT TATTTTATTG
TTGATGGGTG CTTATGATAC GGTGCTCGAA GCCGTTCATA CCTTAAACTT TGTCATTATC
TTTACATTGG TGGCTGGTAT GGCAACGGGA TTATTGCTCT TTACCCGTAT GCTAAAATGG
TTATTATCCC GTTATTATCA AGCGACTCTG GCCTTGCTGA TCGGCTTTAT TGCAGGCTCG
TTGGTCAAAG TCTGGCCATG GAAAACCGAT GCGTTAGGGA CATTAAATAG TGAAGCCATC
CATAACGTCA TGCCATGGCA TTACCCTACC GGTGCTCAAT GGTTAACCAC CTTAAGCTTG
ATGCTATTGG GTGCCATTCT TGTGACTGCT TTATCGCTTT GGGGTCGTCG TAGCCCTAGC
CCTTAA
 
Protein sequence
MTASQSPRPD AQSSSTPSSS TQLDNQPVAD ESSPIYKNSP KQLLGVYVRG LAMGAADIVP 
GVSGGTIALI AGIYERLINA LSSVGPNLWQ VFRQEGGIKG LIAVWRQVDA TFLLFLLMGV
ATSLATLASV IKHLLDNQPL MIWSFFFGLV IATVFLLLSE IKRWNIGRAL LFLLGVASAV
IISSLPLMNT TPSLPYLFVA GAIAICAMIL PGISGSFILL LMGAYDTVLE AVHTLNFVII
FTLVAGMATG LLLFTRMLKW LLSRYYQATL ALLIGFIAGS LVKVWPWKTD ALGTLNSEAI
HNVMPWHYPT GAQWLTTLSL MLLGAILVTA LSLWGRRSPS P