Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1838 |
Symbol | nhaA |
ID | 3515807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2259774 |
End bp | 2260976 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670535 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_265120 |
Protein GI | 71066393 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATAC ATAAAATCAG AGCGTTTTTT AATCTCGAGG CGTCGGGCGG TATTGTCTTA GCGCTGGCAG CTATCGCAGC CATGATTATT GCTAATACTT CTCTAAATAC TTGGTACGAA TCCTTTATTC ACGCACCTGT TGCTATTCAA ATTGGCAGCT TTTCAATCGC TAAAGATGCG CATCATTGGA TTAATGATGG CTTGATGGCG GTATTCTTCT TTTTAGTGGG TCTTGAGCTT AAGCGTGAAG TGTTAATTGG CGAGCTGTCC AATGTAAAGC AAATTATCTT GCCAGCAGGG GCAGCACTTG GCGGTATGGT TATGCCAGCC ATTGTCTATC TGTTTTTTAA CTATAATGAG CCTGAATTTT GGCGAGGTTG GGCGATTCCT ACAGCGACTG ATATTGCCTT TGCCCTTGGT ATTTTGAGCC TACTTGGCAA TCGCGTACCC AACTCATTAA AAGTATTCTT AGTCTCTATT GCTATTTTTG ATGATATTGG CGCGATCATC ATTATTGCTT TATTTTATAC CAATGACTTA TCACTCGGTT CACTCGCTAT CGCAGGCTTA TGTCTGCCGT TCTTATATAT GCTCAATCGT CGTAATGTGA CCAGTATCAC CCCCTATTTG CTAATTGGCG TTATCATGTG GATTGCGGTA CTCAAATCCG GTATCCATGC AACGTTAGCA GGGGTCGTAT TGGCGCTATT TATTCCTTTA TTTGACCGCA CTGACCCTGA GCACTCCCCG CTTGAAGAGC TTGAGCACGA TCTACAAAAC ACGGTTTCCT ATGGCATTTT ACCCCTATTT GCTTTTGCCA ATGCAGGCAT TTCGCTCAAG GGCGCAGGGT TTGGTGAGCT GTTTCATTCT GTGCCGCTTG GTATTGCCGC TGGACTGTTC ATCGGTAAAC AAGTAGGCGT CATGCTGATG TGCTGGTTAA TCTTTAAGCT GGGTATTTCT ACCATGCCAA AAGGCATGAA TTTTAAGCAA ATTTATGGCG CAGCATTGCT ATGCGGTGTC GGCTTTACCA TGAGTTTGTT TATCGGTGGG CTTGCATTTG CCGGTGAGAC TCCATTATTT GATGAGCGTT TAGGTATCAT TATGGGTTCA ATCGTCTCTG GTATCGCCGG TTACATGATG TTAAAAACTA CCTTAAAAGA TGAGGTTAAT GTGACATCTG TAGACTTAAC ACGTCATTCT TAA
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Protein sequence | MAIHKIRAFF NLEASGGIVL ALAAIAAMII ANTSLNTWYE SFIHAPVAIQ IGSFSIAKDA HHWINDGLMA VFFFLVGLEL KREVLIGELS NVKQIILPAG AALGGMVMPA IVYLFFNYNE PEFWRGWAIP TATDIAFALG ILSLLGNRVP NSLKVFLVSI AIFDDIGAII IIALFYTNDL SLGSLAIAGL CLPFLYMLNR RNVTSITPYL LIGVIMWIAV LKSGIHATLA GVVLALFIPL FDRTDPEHSP LEELEHDLQN TVSYGILPLF AFANAGISLK GAGFGELFHS VPLGIAAGLF IGKQVGVMLM CWLIFKLGIS TMPKGMNFKQ IYGAALLCGV GFTMSLFIGG LAFAGETPLF DERLGIIMGS IVSGIAGYMM LKTTLKDEVN VTSVDLTRHS
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