| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1829 |
|---|
| Symbol | ccmA |
|---|
| ID | 3515798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2247671 |
|---|
| End bp | 2248300 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670526 |
|---|
| Product | ABC exporter, ATPase subunit CcmA |
|---|
| Protein accession | YP_265111 |
|---|
| Protein GI | 71066384 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTT TGAATATCGC CTTACTTACG CTTGATGAGC TGACGGTTCA GCGTGGTGAA
ACTCCTTTAT GTGAAGGGCT TGCGCTCAAT TTGTCTGAAG GTAGCATTTG CCATTTGATA
GGTGCAAATG GTACTGGCAA GACGACGTTA CTCATGCAGC TGGCTGGATT ATTACCAGTG
CTAACAGGTG AGGTTTATTA TCAAGGGGTA GTCAGTTTAC CGATGCAGCC TTTGTATGTC
TCGCATCAAT TGGGCATTCA TCCCAATCTC ACTGTCGCTC AAAACCTCAC TTTTTTGCTT
AATTTATATG GTATCACACC AAGCACTGCT GATATTGATG ACGCCCTTGC TTGGGTAGGA
TTACAAGGAT TTGAGACCAT AAGCTCAAGC CATTTATCCG CTGGGCAAAC CCGCCGTATC
ACTCTTGCAC GATTATATTT ATTGACGCCT GAAGTAACGC CATTATGGCT ACTTGATGAG
CCATTTACCG CGCTCGATGT CGATATGGTA GCGCGAATGG AAGACAGATT GCGCGATTTT
GCCAATGAGG GCGGTGCGAT ATTAATGACC AGTCATCAAG CCGTTGAGGT TGCCAATCAG
GTGCTCGATT TATCTGATTA TATGGTATAA
|
|---|
| Protein sequence | MTALNIALLT LDELTVQRGE TPLCEGLALN LSEGSICHLI GANGTGKTTL LMQLAGLLPV
LTGEVYYQGV VSLPMQPLYV SHQLGIHPNL TVAQNLTFLL NLYGITPSTA DIDDALAWVG
LQGFETISSS HLSAGQTRRI TLARLYLLTP EVTPLWLLDE PFTALDVDMV ARMEDRLRDF
ANEGGAILMT SHQAVEVANQ VLDLSDYMV
|
|---|
| |