| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1827 |
|---|
| Symbol | ccmC |
|---|
| ID | 3515796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2245847 |
|---|
| End bp | 2246635 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637670524 |
|---|
| Product | heme exporter, subunit CcmC |
|---|
| Protein accession | YP_265109 |
|---|
| Protein GI | 71066382 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.885175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACC TAAATAATGT CTCATCTCCT AGCCTGTGGC AACGCATTTG GCAAATTTTC
TTGACCACGG TAGGTACCAA GGAGTTCTTT CGCATCTTCT CGCCTTGGGT CAAGTGGCTT
GCGATACTAG CAAGCCTTTG CCTGCTGATC GGCAGTATTT GGGGTCTTGC TTTTGCGCCG
CCTGATTACT TGCAAGGCAA TAGTTACCGT ATTATCTTTA TCCATGTACC AGCGGCCAGC
CTTGCTATTT CCATCTATTT TTCCTTAGCG GTGCTCGGAG TGATTTATTT GGTCTGGAAA
ATTAAGACAG CAAGCCTTGT GGCGCAGGCA CTTGCCCCTC TAGGGTTTTT ATTATGCGTG
ATTAGTTTAT TGACTGGCTC TATTTGGGCA AAACCCACGT GGGGCACCTA CTGGGTTTGG
GATGCACGCC TGACATCGAT GCTGATTTTG GCGTTTTTAT ATGCAGGCGT GATGGCGTTA
TTTGCAGCCT TTGAACACAC GGCAAATCGC GGTAAAGCGG CGGCTATTTT ATCTATCGTT
GGTGCGGTGA ATCTACCGAT TATCAAATAT TCAGTACAGT GGTGGAATAC CTTGCATCAA
GGCTCGACCT TTACCTTGAC TGCTGCACCT AAGATGTCAG CAGATATGTG GCTGCCATTA
TTATTGATGA TTATCGGTAG TTATCTACTG GTTGCGACTT TAGCGATTTA CCGTACTAAT
ACCCTGATTT TGCATCGTGA CCAAGGTAAA GCGTGGGTGA AAGAATACAT TCGCGGACAA
GCCAAATGA
|
|---|
| Protein sequence | MPNLNNVSSP SLWQRIWQIF LTTVGTKEFF RIFSPWVKWL AILASLCLLI GSIWGLAFAP
PDYLQGNSYR IIFIHVPAAS LAISIYFSLA VLGVIYLVWK IKTASLVAQA LAPLGFLLCV
ISLLTGSIWA KPTWGTYWVW DARLTSMLIL AFLYAGVMAL FAAFEHTANR GKAAAILSIV
GAVNLPIIKY SVQWWNTLHQ GSTFTLTAAP KMSADMWLPL LLMIIGSYLL VATLAIYRTN
TLILHRDQGK AWVKEYIRGQ AK
|
|---|
| |