| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1826 |
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| Symbol | ccmD |
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| ID | 3515795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2245590 |
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| End bp | 2245814 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670523 |
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| Product | cytochrome c biogenesis protein, CcmD |
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| Protein accession | YP_265108 |
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| Protein GI | 71066381 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.180255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCAGC CTTACTTCTA TAGTTTTTCT GAGTTTATCG CCATGGGTAA GCATGGGGTG
TTTGTCTGGT CATGCTGGGC AATTACCGTT GGCATGATGC TGATTTTTGT CCTCTATAGC
CGCCGGCAGC GACAAGCGCT TATCAAGCAA CTGGCGATTC AGCAAGCTCG TCAGGCACAG
CGCACGACCA AAATTCCAAC ACCTGTGACC AAAGATACTC ATTAA
|
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| Protein sequence | MMQPYFYSFS EFIAMGKHGV FVWSCWAITV GMMLIFVLYS RRQRQALIKQ LAIQQARQAQ
RTTKIPTPVT KDTH
|
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