Gene Psyc_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1788 
Symbol 
ID3515757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2199408 
End bp2200193 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content39% 
IMG OID637670485 
ProductIS3 family transposase 
Protein accessionYP_265070 
Protein GI71066343 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA GCAGTTTCTA CTACCATAGA ACCATGCTAG GGGATAAAGA TAAATACGCT 
GACTTAAAAC AGCGTATCAC GGCGCTATAC CACAAGCATA AAGGCAGATA TGGCTATCGC
AGAATGACTG TCGCATTAAA GCATTTAGGT GTCCATCATA ATCATAAGCT TATTGCCAAG
CTCATGAAAC AGTTGACACT CAGTGCAAAG ATAAGAAGAC AAAAGTACCG CTCCTATAAA
GGACAGCAGG GTAAAATAGC AAAGAATTAT TTAAAGCGTC GGTTTAAAGC AAGCAAACCA
CATAAGCGGT GGCTCACTGA TATTACTGAG TTTAAGGTAG GTGACCATAA GTTATATTTA
TCGCCAATAC TCGATTGTTA TAACAATGAG ATAGTCAGTT ATACGCTCTC AAGAAGGCCA
ACCTATGATT TGGTAAGCCA AATGCTTGAT AAGGCGTTGG ACCAGACTGG AAAACATCGT
CATAAGACGT TAATGCTACA TTCTGATCAG GGATGGCATT ATCAAATGAA GCCGTTTAGG
GAGATGCTTA AAAAGCATCA GATAAAACAG AGTATGAGCA GGAAAGGCAA CTGCTTGGAT
AATGCGTTAA TGGAGGGGTT CTTCGGTACG CTAAAGTGTG AGACTATCTA TATTGAGAAG
CCTAAAACGA TTGAAGCTTT AGAGAGACAG ATTCATGAGT ATATTCATTA CTACAATCAT
GAACGTATTC AGCTTAAATT AAAAGGACTG AGTCCTGTAC AGTACAGAAC TCAGTCTTTG
AAATAA
 
Protein sequence
MPKSSFYYHR TMLGDKDKYA DLKQRITALY HKHKGRYGYR RMTVALKHLG VHHNHKLIAK 
LMKQLTLSAK IRRQKYRSYK GQQGKIAKNY LKRRFKASKP HKRWLTDITE FKVGDHKLYL
SPILDCYNNE IVSYTLSRRP TYDLVSQMLD KALDQTGKHR HKTLMLHSDQ GWHYQMKPFR
EMLKKHQIKQ SMSRKGNCLD NALMEGFFGT LKCETIYIEK PKTIEALERQ IHEYIHYYNH
ERIQLKLKGL SPVQYRTQSL K